The 2.0 version of rSNPBase

Variant report

Variant rs58769218
Chromosome Location chr13:49823761-49823762
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49822600-49823800 Flanking Active TSS Dnd41 blood
2 chr13:49822600-49824200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr13:49822600-49824800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr13:49822600-49826200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr13:49823000-49823800 Enhancers Primary T cells fromperipheralblood blood
6 chr13:49823000-49823800 Weak transcription Fetal Muscle Trunk muscle
7 chr13:49823000-49824000 Enhancers Fetal Heart heart
8 chr13:49823000-49824800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr13:49823000-49826200 Weak transcription Gastric stomach
10 chr13:49823000-49826200 Weak transcription Pancreas Pancrea
11 chr13:49823000-49826200 Weak transcription Psoas Muscle Psoas
12 chr13:49823000-49826200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr13:49823000-49826200 Weak transcription Spleen Spleen
14 chr13:49823000-49826600 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr13:49823000-49827800 Weak transcription Aorta Aorta
16 chr13:49823000-49828000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr13:49823000-49829200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr13:49823000-49829200 Weak transcription HSMMtube muscle
19 chr13:49823000-49833600 Weak transcription Esophagus oesophagus
20 chr13:49823000-49833600 Weak transcription Lung lung
21 chr13:49823000-49833600 Weak transcription Placenta Amnion Placenta Amnion
22 chr13:49823000-49833800 Weak transcription Brain Cingulate Gyrus brain
23 chr13:49823000-49833800 Weak transcription Fetal Brain Male brain
24 chr13:49823000-49836400 Weak transcription Colonic Mucosa Colon
25 chr13:49823000-49837000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr13:49823000-49838000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr13:49823000-49838200 Weak transcription H9 Cell Line embryonic stem cell
28 chr13:49823000-49844200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr13:49823200-49823800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr13:49823200-49823800 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr13:49823200-49823800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr13:49823200-49823800 Weak transcription Fetal Muscle Leg muscle
33 chr13:49823200-49824000 Enhancers GM12878-XiMat blood
34 chr13:49823200-49824200 Enhancers Primary T helper cells fromperipheralblood blood
35 chr13:49823200-49824400 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr13:49823200-49824600 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr13:49823200-49824600 Enhancers Liver Liver
38 chr13:49823200-49824600 Enhancers Duodenum Smooth Muscle Duodenum
39 chr13:49823200-49825200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr13:49823200-49825200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr13:49823200-49825800 Weak transcription Primary monocytes fromperipheralblood blood
42 chr13:49823200-49826200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr13:49823200-49826200 Weak transcription Fetal Intestine Small intestine
44 chr13:49823200-49826200 Weak transcription Left Ventricle heart
45 chr13:49823200-49826200 Weak transcription Right Atrium heart
46 chr13:49823200-49826200 Weak transcription Right Ventricle heart
47 chr13:49823200-49826400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr13:49823200-49827600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr13:49823200-49827600 Weak transcription HSMM muscle
50 chr13:49823200-49827800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015