The 2.0 version of rSNPBase

Variant report

Variant rs74074539
Chromosome Location chr13:49874916-49874917
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49826600-49877800 Weak transcription Psoas Muscle Psoas
2 chr13:49834200-49875200 Weak transcription Gastric stomach
3 chr13:49834800-49875400 Weak transcription Esophagus oesophagus
4 chr13:49835800-49875200 Weak transcription Primary B cells from peripheral blood blood
5 chr13:49835800-49875200 Weak transcription GM12878-XiMat blood
6 chr13:49838600-49875400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr13:49842800-49875200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr13:49853800-49875400 Weak transcription Primary T cells from cord blood blood
11 chr13:49853800-49875400 Weak transcription Fetal Intestine Large intestine
12 chr13:49854000-49875000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr13:49854000-49875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr13:49854000-49875200 Weak transcription Duodenum Mucosa Duodenum
15 chr13:49854000-49877600 Weak transcription Left Ventricle heart
16 chr13:49854000-49883000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr13:49855000-49875200 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr13:49857200-49875200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr13:49862000-49875400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr13:49862000-49875600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr13:49863200-49875000 Weak transcription Dnd41 blood
22 chr13:49867200-49875200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr13:49867200-49875200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:49867200-49875200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr13:49867200-49875200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr13:49867200-49875200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr13:49867200-49876800 Weak transcription Thymus Thymus
28 chr13:49867200-49884200 Weak transcription Fetal Brain Female brain
29 chr13:49867400-49875200 Weak transcription Primary T cells fromperipheralblood blood
30 chr13:49867400-49875200 Weak transcription Brain Germinal Matrix brain
31 chr13:49867400-49875200 Weak transcription Osteobl bone
32 chr13:49867400-49875600 Weak transcription Muscle Satellite Cultured Cells --
33 chr13:49867600-49875400 Weak transcription Primary hematopoietic stem cells blood
34 chr13:49867800-49875200 Weak transcription NHLF lung
35 chr13:49867800-49875400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr13:49868000-49875400 Weak transcription Primary B cells from cord blood blood
37 chr13:49868400-49875400 Weak transcription Primary monocytes fromperipheralblood blood
38 chr13:49868400-49877000 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr13:49869200-49879200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr13:49869600-49882200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr13:49869800-49875200 Weak transcription Liver Liver
42 chr13:49869800-49875200 Weak transcription Colon Smooth Muscle Colon
43 chr13:49869800-49875600 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr13:49869800-49877200 Weak transcription Lung lung
45 chr13:49870000-49875200 Weak transcription Rectal Smooth Muscle rectum
46 chr13:49870200-49875200 Weak transcription Stomach Smooth Muscle stomach
47 chr13:49870200-49875400 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr13:49871000-49875400 Weak transcription Fetal Intestine Small intestine
49 chr13:49871600-49880400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr13:49871800-49875400 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015