Variant report

Variant	rs58782831
Chromosome Location	chr15:83573139-83573140
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11852370	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11853382	1.00[AMR][1000 genomes]
rs11856497	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11856798	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17158172	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59286119	1.00[AMR][1000 genomes]
rs7171702	0.85[AMR][1000 genomes]
rs7174267	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7178757	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73446957	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73446974	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73446978	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83540600-83573200	Weak transcription	Right Atrium	heart
2	chr15:83568200-83585400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr15:83570200-83573400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr15:83570400-83573400	Weak transcription	Left Ventricle	heart
5	chr15:83570400-83591600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr15:83570800-83573600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr15:83570800-83574800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr15:83571600-83573600	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr15:83571800-83574000	Enhancers	Pancreas	Pancrea
10	chr15:83572800-83573600	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr15:83573000-83573200	Enhancers	Gastric	stomach
12	chr15:83573000-83573600	Enhancers	H1 Cell Line	embryonic stem cell
13	chr15:83573000-83573600	Enhancers	Psoas Muscle	Psoas
14	chr15:83573000-83574000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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