The 2.0 version of rSNPBase

Variant report

Variant rs58794982
Chromosome Location chr9:13151002-13151003
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:13103200-13163400 Weak transcription H9 Cell Line embryonic stem cell
2 chr9:13103200-13175600 Weak transcription HepG2 liver
3 chr9:13106000-13153400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr9:13121600-13225200 Weak transcription Placenta Amnion Placenta Amnion
5 chr9:13122600-13186400 Weak transcription Primary hematopoietic stem cells blood
6 chr9:13135400-13223600 Weak transcription Lung lung
7 chr9:13136000-13192400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr9:13137400-13152800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:13138200-13161000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr9:13138800-13159800 Weak transcription Aorta Aorta
11 chr9:13138800-13191800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr9:13139000-13188200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr9:13139800-13174800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr9:13140200-13152000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr9:13140200-13152200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr9:13140200-13153600 Weak transcription Fetal Intestine Small intestine
17 chr9:13140200-13157000 Weak transcription Placenta Placenta
18 chr9:13140200-13161200 Weak transcription Fetal Stomach stomach
19 chr9:13140200-13167800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:13140200-13174800 Weak transcription Right Ventricle heart
21 chr9:13141000-13181600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr9:13141000-13197800 Weak transcription NHDF-Ad bronchial
23 chr9:13141200-13188200 Weak transcription NHLF lung
24 chr9:13142200-13155800 Weak transcription Muscle Satellite Cultured Cells --
25 chr9:13143600-13157200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr9:13143600-13202200 Weak transcription Pancreas Pancrea
27 chr9:13143800-13152800 Weak transcription Fetal Kidney kidney
28 chr9:13143800-13164800 Weak transcription Fetal Brain Female brain
29 chr9:13143800-13167800 Weak transcription H1 Cell Line embryonic stem cell
30 chr9:13144800-13160000 Weak transcription Brain Cingulate Gyrus brain
31 chr9:13145000-13151200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr9:13145000-13153400 Weak transcription Colon Smooth Muscle Colon
33 chr9:13145000-13161600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr9:13145200-13152600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr9:13145400-13163600 Weak transcription Brain Hippocampus Middle brain
36 chr9:13145400-13163600 Weak transcription Brain Substantia Nigra brain
37 chr9:13145400-13203200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr9:13145400-13228600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr9:13145600-13163400 Weak transcription Brain Germinal Matrix brain
40 chr9:13146200-13163000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr9:13146400-13152600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr9:13146600-13153600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr9:13146600-13202400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr9:13147000-13178000 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr9:13147600-13152600 Weak transcription Fetal Lung lung
46 chr9:13147600-13153400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr9:13147600-13155800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr9:13147600-13160000 Weak transcription Brain Anterior Caudate brain
49 chr9:13147800-13152200 Weak transcription Left Ventricle heart
50 chr9:13147800-13152600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015