The 2.0 version of rSNPBase

Variant report

Variant rs58854261
Chromosome Location chr2:86145142-86145143
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86133200-86149200 Weak transcription Stomach Smooth Muscle stomach
2 chr2:86133200-86152000 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:86134400-86148000 Weak transcription Thymus Thymus
4 chr2:86135400-86148000 Weak transcription Pancreas Pancrea
5 chr2:86135400-86151600 Weak transcription Fetal Muscle Trunk muscle
6 chr2:86135400-86151600 Weak transcription Lung lung
7 chr2:86135400-86152600 Weak transcription Psoas Muscle Psoas
8 chr2:86138200-86151600 Weak transcription Fetal Muscle Leg muscle
9 chr2:86138600-86147400 Weak transcription Fetal Thymus thymus
10 chr2:86140000-86148000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr2:86142000-86147200 Weak transcription Adipose Nuclei Adipose
12 chr2:86142200-86155800 Weak transcription Primary T cells from cord blood blood
13 chr2:86142400-86148000 Weak transcription K562 blood
14 chr2:86142400-86151800 Weak transcription Primary B cells from peripheral blood blood
15 chr2:86142400-86157800 Weak transcription Aorta Aorta
16 chr2:86142600-86147400 Weak transcription Liver Liver
17 chr2:86142600-86151000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:86142600-86151600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:86143200-86146800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr2:86143200-86148200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr2:86143200-86148200 Weak transcription Brain Angular Gyrus brain
22 chr2:86143200-86148400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:86143200-86150800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr2:86143400-86147800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr2:86143400-86148000 Weak transcription Brain Cingulate Gyrus brain
26 chr2:86143400-86148200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:86143400-86148200 Weak transcription Ovary ovary
28 chr2:86143400-86148400 Weak transcription Colon Smooth Muscle Colon
29 chr2:86143600-86145200 Weak transcription NHDF-Ad bronchial
30 chr2:86143600-86145800 Weak transcription Brain Hippocampus Middle brain
31 chr2:86143600-86147800 Weak transcription Brain Anterior Caudate brain
32 chr2:86143600-86148000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr2:86143600-86148000 Weak transcription Brain Substantia Nigra brain
34 chr2:86144800-86145800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:86145000-86145400 Enhancers NHEK skin
36 chr2:86145000-86145600 Enhancers A549 lung
37 chr2:86145000-86145600 Enhancers HMEC breast
38 chr2:86145000-86146000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:86145000-86146000 Enhancers Hela-S3 cervix

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Last update: Aug 31, 2015