The 2.0 version of rSNPBase

Variant report

Variant rs73943915
Chromosome Location chr2:86157953-86157954
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86152200-86163400 Weak transcription Fetal Muscle Trunk muscle
2 chr2:86152400-86163000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:86152800-86161000 Weak transcription Liver Liver
4 chr2:86152800-86162400 Weak transcription Right Atrium heart
5 chr2:86153400-86158800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:86154400-86161000 Weak transcription Stomach Mucosa stomach
7 chr2:86154800-86160400 Weak transcription Osteobl bone
8 chr2:86154800-86162800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:86155000-86162600 Weak transcription Brain Angular Gyrus brain
10 chr2:86155000-86162600 Weak transcription Brain Cingulate Gyrus brain
11 chr2:86155200-86162600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr2:86155400-86159200 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr2:86156000-86159200 Weak transcription Primary T cells from cord blood blood
14 chr2:86156000-86159200 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr2:86156200-86158200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr2:86156200-86159600 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr2:86156400-86158800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:86156400-86163600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:86156600-86159600 Weak transcription Fetal Thymus thymus
20 chr2:86156600-86160800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:86156600-86160800 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr2:86156600-86163200 Enhancers Hela-S3 cervix
23 chr2:86156800-86158200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:86156800-86158800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:86156800-86159600 Enhancers A549 lung
26 chr2:86157000-86158000 Enhancers Brain Hippocampus Middle brain
27 chr2:86157000-86160800 Weak transcription NH-A brain
28 chr2:86157200-86158000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:86157200-86158000 Enhancers Placenta Placenta
30 chr2:86157200-86158200 Enhancers Adipose Nuclei Adipose
31 chr2:86157400-86158200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr2:86157400-86158200 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr2:86157400-86159000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:86157600-86158400 Enhancers HMEC breast
35 chr2:86157600-86159000 Enhancers NHEK skin
36 chr2:86157800-86158400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:86157800-86160400 Weak transcription K562 blood
38 chr2:86157800-86160800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:86157800-86160800 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:86157800-86160800 Weak transcription Ovary ovary
41 chr2:86157800-86161000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr2:86157800-86161000 Weak transcription Fetal Muscle Leg muscle
43 chr2:86157800-86162400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr2:86157800-86162600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr2:86157800-86163000 Weak transcription Pancreas Pancrea
46 chr2:86157800-86163000 Weak transcription Spleen Spleen
47 chr2:86157800-86163200 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015