The 2.0 version of rSNPBase

Variant report

Variant rs58958163
Chromosome Location chr15:52107593-52107594
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52061600-52112000 Weak transcription NHLF lung
2 chr15:52085800-52108800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr15:52091200-52109400 Weak transcription Gastric stomach
4 chr15:52091800-52108200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr15:52092000-52107800 Weak transcription Fetal Muscle Leg muscle
6 chr15:52093800-52108600 Weak transcription Fetal Lung lung
7 chr15:52098800-52108800 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr15:52099200-52108800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr15:52099600-52108600 Weak transcription Primary B cells from peripheral blood blood
10 chr15:52099600-52108800 Weak transcription Duodenum Mucosa Duodenum
11 chr15:52099800-52108400 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr15:52099800-52109000 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr15:52099800-52109400 Weak transcription Spleen Spleen
14 chr15:52099800-52110000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr15:52099800-52110400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr15:52099800-52110400 Weak transcription Left Ventricle heart
17 chr15:52099800-52113800 Weak transcription Aorta Aorta
18 chr15:52100000-52109400 Weak transcription Esophagus oesophagus
19 chr15:52100000-52109400 Weak transcription Fetal Stomach stomach
20 chr15:52100000-52109400 Weak transcription Lung lung
21 chr15:52100000-52110200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr15:52100000-52113200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr15:52100200-52109400 Weak transcription Fetal Brain Female brain
24 chr15:52100400-52108400 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr15:52100600-52109800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr15:52101200-52108800 Weak transcription Primary hematopoietic stem cells blood
27 chr15:52101200-52110200 Weak transcription NHDF-Ad bronchial
28 chr15:52101600-52113000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr15:52101800-52110200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr15:52102000-52108400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr15:52102000-52108400 Weak transcription Brain Substantia Nigra brain
32 chr15:52102000-52113400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr15:52102400-52108200 Weak transcription Fetal Intestine Large intestine
34 chr15:52102400-52109000 Weak transcription Adipose Nuclei Adipose
35 chr15:52103000-52108000 Weak transcription Fetal Intestine Small intestine
36 chr15:52103000-52109000 Weak transcription Colon Smooth Muscle Colon
37 chr15:52103000-52111600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr15:52104000-52107600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr15:52104400-52113400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr15:52104400-52113600 Weak transcription Brain Cingulate Gyrus brain
41 chr15:52105600-52113200 Weak transcription Primary B cells from cord blood blood
42 chr15:52105800-52107600 Strong transcription Primary monocytes fromperipheralblood blood
43 chr15:52105800-52111600 Weak transcription Thymus Thymus
44 chr15:52106600-52111800 Weak transcription Brain Hippocampus Middle brain
45 chr15:52106800-52108800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr15:52106800-52110200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr15:52106800-52113400 Weak transcription Brain Germinal Matrix brain
48 chr15:52107000-52110600 Weak transcription Stomach Smooth Muscle stomach
49 chr15:52107000-52113200 Weak transcription Brain Inferior Temporal Lobe brain
50 chr15:52107000-52113600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015