Variant report

Variant	rs59039524
Chromosome Location	chr8:9497472-9497473
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:9408610..9410364-chr8:9497260..9500179,3	K562	blood:
2	chr8:9408610..9410129-chr8:9497260..9499270,2	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs4587340	1.00[AFR][1000 genomes]
rs57409491	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530864	chr8:9097498-9914548	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv497927	chr8:9097611-9544519	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv610225	chr8:9493701-9499605	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv437043	chr8:9493701-9501447	Enhancers Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv995663	chr8:9495365-9501901	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3478834	chr8:9496342-9502940	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv610226	chr8:9496467-9499346	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv610227	chr8:9496467-9499605	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv610228	chr8:9496467-9499655	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv610229	chr8:9496467-9500013	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv610230	chr8:9496467-9500595	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv610231	chr8:9496467-9500692	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv610232	chr8:9496467-9500876	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3487490	chr8:9496642-9502090	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv982121	chr8:9496725-9500629	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3487491	chr8:9497042-9501990	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv2509921	chr8:9497183-9501429	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv3487494	chr8:9497334-9502231	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv3478836	chr8:9497440-9501453	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9474200-9509000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:9481000-9510800	Weak transcription	Primary B cells from cord blood	blood
3	chr8:9481200-9508400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr8:9481800-9501400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr8:9484800-9504600	Weak transcription	Primary T cells from cord blood	blood
6	chr8:9485000-9502800	Weak transcription	Psoas Muscle	Psoas
7	chr8:9485600-9498200	Weak transcription	Ovary	ovary
8	chr8:9485600-9510400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:9485600-9510400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr8:9485800-9508000	Weak transcription	Fetal Brain Female	brain
11	chr8:9486400-9502800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
12	chr8:9487200-9500600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:9487400-9509000	Weak transcription	Primary hematopoietic stem cells	blood
14	chr8:9487800-9508400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr8:9491200-9502800	Weak transcription	Aorta	Aorta
16	chr8:9491400-9504200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr8:9491400-9507800	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr8:9491400-9509000	Weak transcription	HSMM	muscle
19	chr8:9492200-9508000	Weak transcription	NH-A	brain
20	chr8:9492400-9507800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr8:9493600-9509000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr8:9494400-9510400	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr8:9494600-9510600	Weak transcription	Fetal Kidney	kidney
24	chr8:9495200-9499200	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr8:9495200-9501200	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr8:9495800-9531000	Weak transcription	Gastric	stomach
27	chr8:9496800-9502600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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