Variant report

Variant	rs59046982
Chromosome Location	chr12:121028145-121028146
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10515974	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1167257	1.00[EUR][1000 genomes]
rs16950279	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16950282	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1794740	1.00[EUR][1000 genomes]
rs2233672	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56821784	1.00[AMR][1000 genomes]
rs57810519	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58440772	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58811988	1.00[EUR][1000 genomes]
rs58820431	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59055537	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59211409	1.00[EUR][1000 genomes]
rs59253114	1.00[EUR][1000 genomes]
rs59349654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59986216	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60688174	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6490298	1.00[EUR][1000 genomes]
rs7304206	1.00[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121022800-121028800	Weak transcription	Esophagus	oesophagus
2	chr12:121027200-121029400	Weak transcription	Colonic Mucosa	Colon
3	chr12:121027400-121028600	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr12:121027400-121028800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:121027600-121028200	Weak transcription	Stomach Mucosa	stomach
6	chr12:121027600-121029200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr12:121028000-121033200	Weak transcription	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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