The 2.0 version of rSNPBase

Variant report

Variant rs59201594
Chromosome Location chr10:25214355-25214356
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:25191600-25240600 Weak transcription Stomach Smooth Muscle stomach
2 chr10:25195400-25223400 Weak transcription Fetal Brain Female brain
3 chr10:25198200-25228000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr10:25198400-25217800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr10:25202400-25218000 Weak transcription Fetal Lung lung
6 chr10:25210400-25214600 Weak transcription Fetal Brain Male brain
7 chr10:25210400-25236600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr10:25210600-25214400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr10:25210600-25214600 Weak transcription Brain Anterior Caudate brain
10 chr10:25210600-25214600 Weak transcription Fetal Muscle Trunk muscle
11 chr10:25210600-25214800 Weak transcription Left Ventricle heart
12 chr10:25210600-25215400 Weak transcription Brain Cingulate Gyrus brain
13 chr10:25210600-25215600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr10:25210600-25215600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr10:25210600-25216000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr10:25210600-25216200 Weak transcription Colonic Mucosa Colon
17 chr10:25210600-25216600 Weak transcription Primary T cells fromperipheralblood blood
18 chr10:25210600-25217000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr10:25210600-25218200 Weak transcription Ovary ovary
20 chr10:25210600-25218800 Weak transcription Right Atrium heart
21 chr10:25210600-25233400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr10:25210600-25233400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr10:25210800-25214800 Weak transcription Brain Angular Gyrus brain
24 chr10:25210800-25214800 Weak transcription Dnd41 blood
25 chr10:25210800-25218000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr10:25210800-25218000 Weak transcription NHLF lung
27 chr10:25210800-25218200 Weak transcription Brain Hippocampus Middle brain
28 chr10:25211000-25214800 Weak transcription Brain Substantia Nigra brain
29 chr10:25211400-25218800 Weak transcription A549 lung
30 chr10:25211400-25239800 Weak transcription Fetal Kidney kidney
31 chr10:25211600-25218000 Weak transcription K562 blood
32 chr10:25211800-25218000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr10:25212000-25214600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr10:25212000-25218400 Weak transcription NHDF-Ad bronchial
35 chr10:25212200-25218000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr10:25212400-25215800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr10:25212400-25224800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:25212600-25214800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr10:25214000-25214400 ZNF genes & repeats Fetal Stomach stomach
40 chr10:25214000-25214800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr10:25214000-25214800 ZNF genes & repeats Fetal Intestine Small intestine
42 chr10:25214000-25223200 Weak transcription Brain Germinal Matrix brain
43 chr10:25214200-25215000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr10:25214200-25215800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015