Variant report

Variant	rs59212517
Chromosome Location	chr9:84749355-84749356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1409883	1.00[EUR][1000 genomes]
rs17085423	1.00[EUR][1000 genomes]
rs73476171	1.00[EUR][1000 genomes]
rs73476179	1.00[EUR][1000 genomes]
rs73476189	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049305	chr9:84667596-84918690	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831640	chr9:84695958-84880535	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:84747000-84750400	Weak transcription	Primary B cells from cord blood	blood
2	chr9:84748200-84749600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:84748400-84750000	Enhancers	HUVEC	blood vessel
4	chr9:84748800-84749400	Enhancers	Osteobl	bone
5	chr9:84749000-84749400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr9:84749000-84749400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr9:84749000-84749600	Enhancers	NHDF-Ad	bronchial
8	chr9:84749200-84749400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:84749200-84749400	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr9:84749200-84749600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr9:84749200-84749600	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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