Variant report

Variant	rs59218105
Chromosome Location	chr10:89922554-89922555
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17420329	1.00[ASN][1000 genomes]
rs61855303	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831940	chr10:89811247-89989199	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89912800-89925000	Weak transcription	Left Ventricle	heart
2	chr10:89913000-89924400	Weak transcription	Right Atrium	heart
3	chr10:89915200-89929600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:89918200-89937600	Weak transcription	Aorta	Aorta
5	chr10:89918400-89925600	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr10:89919000-89924200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:89919200-89922600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr10:89919200-89922600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:89919200-89922600	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr10:89919200-89922600	Weak transcription	NHLF	lung
11	chr10:89919200-89922800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr10:89919200-89922800	Weak transcription	Psoas Muscle	Psoas
13	chr10:89919200-89923400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr10:89919200-89923600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr10:89919200-89924200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr10:89919200-89924200	Weak transcription	NHDF-Ad	bronchial
17	chr10:89919200-89924400	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr10:89919200-89925200	Weak transcription	NH-A	brain
19	chr10:89919200-89925600	Weak transcription	NHEK	skin
20	chr10:89920400-89923200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr10:89920600-89923800	Enhancers	Fetal Lung	lung
22	chr10:89921200-89922600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr10:89921200-89922600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr10:89921600-89927000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr10:89922000-89924200	Weak transcription	Ovary	ovary
26	chr10:89922000-89937600	Weak transcription	Thymus	Thymus
27	chr10:89922200-89923200	Enhancers	HMEC	breast
28	chr10:89922200-89923400	Enhancers	Primary monocytes fromperipheralblood	blood
29	chr10:89922200-89923400	Enhancers	Monocytes-CD14+_RO01746	blood
30	chr10:89922200-89923600	Enhancers	HUVEC	blood vessel
31	chr10:89922400-89922800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr10:89922400-89923200	Enhancers	GM12878-XiMat	blood

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