The 2.0 version of rSNPBase

Variant report

Variant rs59233154
Chromosome Location chr22:32263950-32263951
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32192400-32266600 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr22:32242400-32313400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr22:32242800-32266400 Strong transcription Primary monocytes fromperipheralblood blood
4 chr22:32243200-32294200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr22:32243600-32266200 Weak transcription A549 lung
6 chr22:32244400-32266200 Weak transcription HUVEC blood vessel
7 chr22:32244400-32305400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr22:32244600-32264200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr22:32244600-32266800 Weak transcription Colon Smooth Muscle Colon
10 chr22:32244600-32270200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr22:32244600-32303400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr22:32244800-32266600 Weak transcription Osteobl bone
13 chr22:32247000-32282400 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr22:32247600-32307400 Weak transcription Hela-S3 cervix
15 chr22:32247800-32264800 Weak transcription H1 Cell Line embryonic stem cell
16 chr22:32247800-32270400 Weak transcription Psoas Muscle Psoas
17 chr22:32249200-32289200 Weak transcription HepG2 liver
18 chr22:32250800-32266200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr22:32252400-32266600 Weak transcription Rectal Smooth Muscle rectum
20 chr22:32253400-32275600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr22:32253800-32266600 Weak transcription Fetal Kidney kidney
22 chr22:32253800-32268800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr22:32254200-32266600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr22:32254200-32293800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr22:32254400-32264600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr22:32254400-32265000 Weak transcription Aorta Aorta
27 chr22:32254400-32266200 Weak transcription Fetal Thymus thymus
28 chr22:32254400-32267400 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr22:32254400-32270800 Weak transcription Small Intestine intestine
30 chr22:32255400-32273000 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr22:32255800-32282600 Strong transcription Fetal Muscle Leg muscle
32 chr22:32256200-32266600 Weak transcription Placenta Amnion Placenta Amnion
33 chr22:32256400-32264600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr22:32256400-32266600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr22:32256400-32268200 Weak transcription Colonic Mucosa Colon
36 chr22:32256600-32265600 Weak transcription Fetal Heart heart
37 chr22:32256600-32266600 Weak transcription Brain Cingulate Gyrus brain
38 chr22:32256600-32266800 Weak transcription Brain Angular Gyrus brain
39 chr22:32256800-32293400 Weak transcription Fetal Brain Male brain
40 chr22:32257000-32266600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr22:32257200-32266400 Weak transcription Fetal Lung lung
42 chr22:32257600-32264400 Weak transcription Esophagus oesophagus
43 chr22:32257600-32265600 Weak transcription Gastric stomach
44 chr22:32257600-32266200 Weak transcription Brain Hippocampus Middle brain
45 chr22:32257600-32266600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr22:32257600-32266600 Weak transcription Right Ventricle heart
47 chr22:32257600-32266800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr22:32257600-32269200 Weak transcription Pancreas Pancrea
49 chr22:32257800-32264400 Weak transcription Stomach Smooth Muscle stomach
50 chr22:32257800-32264800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015