The 2.0 version of rSNPBase

Variant report

Variant rs61167824
Chromosome Location chr22:32253298-32253299
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32172200-32254400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr22:32188800-32259600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr22:32192400-32266600 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr22:32205200-32257600 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr22:32209000-32254600 Strong transcription Primary T regulatory cells fromperipheralblood blood
6 chr22:32221400-32254600 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr22:32226200-32263200 Weak transcription Stomach Mucosa stomach
8 chr22:32227000-32254200 Strong transcription Fetal Intestine Small intestine
9 chr22:32227600-32254200 Strong transcription Duodenum Mucosa Duodenum
10 chr22:32229600-32254600 Strong transcription Fetal Muscle Trunk muscle
11 chr22:32231400-32260400 Strong transcription Liver Liver
12 chr22:32236000-32255000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr22:32238000-32258000 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr22:32241400-32263600 Weak transcription HSMMtube muscle
15 chr22:32242000-32253600 Weak transcription Fetal Kidney kidney
16 chr22:32242400-32313400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr22:32242800-32266400 Strong transcription Primary monocytes fromperipheralblood blood
18 chr22:32243000-32263000 Strong transcription Primary B cells from peripheral blood blood
19 chr22:32243200-32294200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr22:32243600-32266200 Weak transcription A549 lung
21 chr22:32244000-32257400 Weak transcription HMEC breast
22 chr22:32244400-32253400 Weak transcription Brain Substantia Nigra brain
23 chr22:32244400-32266200 Weak transcription HUVEC blood vessel
24 chr22:32244400-32305400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr22:32244600-32263000 Weak transcription H9 Cell Line embryonic stem cell
26 chr22:32244600-32264200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr22:32244600-32266800 Weak transcription Colon Smooth Muscle Colon
28 chr22:32244600-32270200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr22:32244600-32303400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr22:32244800-32266600 Weak transcription Osteobl bone
31 chr22:32246800-32259000 Strong transcription Primary T cells from cord blood blood
32 chr22:32247000-32254200 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr22:32247000-32258000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr22:32247000-32282400 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr22:32247600-32256000 Weak transcription Fetal Heart heart
36 chr22:32247600-32307400 Weak transcription Hela-S3 cervix
37 chr22:32247800-32255800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr22:32247800-32255800 Weak transcription Brain Cingulate Gyrus brain
39 chr22:32247800-32258600 Weak transcription HSMM muscle
40 chr22:32247800-32264800 Weak transcription H1 Cell Line embryonic stem cell
41 chr22:32247800-32270400 Weak transcription Psoas Muscle Psoas
42 chr22:32248000-32257400 Weak transcription NHLF lung
43 chr22:32249200-32289200 Weak transcription HepG2 liver
44 chr22:32249400-32253800 Weak transcription Muscle Satellite Cultured Cells --
45 chr22:32249400-32254200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr22:32249400-32257200 Weak transcription NHEK skin
47 chr22:32249400-32259400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr22:32249600-32257400 Weak transcription NH-A brain
49 chr22:32250200-32259000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr22:32250400-32253400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015