Variant report

Variant	rs59272803
Chromosome Location	chr7:18888211-18888212
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs73312699	1.00[AFR][1000 genomes]
rs73320008	1.00[AFR][1000 genomes]
rs73320015	1.00[AFR][1000 genomes]
rs73320023	1.00[AFR][1000 genomes]
rs73320036	1.00[AFR][1000 genomes]
rs73320039	1.00[AFR][1000 genomes]
rs73320060	1.00[AFR][1000 genomes]
rs73320062	1.00[AFR][1000 genomes]
rs73320063	1.00[AFR][1000 genomes]
rs73320065	1.00[AFR][1000 genomes]
rs73320089	1.00[AFR][1000 genomes]
rs73320093	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18884000-18888800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:18885600-18888400	Weak transcription	HUVEC	blood vessel
3	chr7:18887000-18888400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:18887600-18888800	Weak transcription	NHDF-Ad	bronchial
5	chr7:18888200-18890400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr7:18888200-18895000	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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