Variant report

Variant	rs5937904
Chromosome Location	chrX:74065953-74065954
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12688056	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs12689586	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs16991813	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs16991826	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs2366467	1.00[CEU][hapmap]
rs5937297	1.00[CEU][hapmap]
rs5937314	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs5981697	1.00[CEU][hapmap];1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916758	chrX:73546406-74420929	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	esv3395402	chrX:74046980-74069464	Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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