Variant report

Variant rs59560108
Chromosome Location chr15:57598024-57598025
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57537800-57598200 Weak transcription Colonic Mucosa Colon
2 chr15:57578600-57598200 Weak transcription Right Ventricle heart
3 chr15:57579600-57598200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr15:57580000-57598400 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr15:57580000-57598400 Weak transcription Fetal Brain Male brain
6 chr15:57580000-57598400 Weak transcription NHEK skin
7 chr15:57583400-57598400 Weak transcription Thymus Thymus
8 chr15:57583600-57598200 Weak transcription Stomach Smooth Muscle stomach
9 chr15:57583600-57598400 Weak transcription A549 lung
10 chr15:57584000-57598200 Weak transcription Brain Germinal Matrix brain
11 chr15:57584400-57598200 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr15:57584600-57598200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr15:57584600-57598200 Weak transcription Fetal Stomach stomach
14 chr15:57585000-57598400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr15:57585800-57598200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr15:57589200-57598200 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr15:57589400-57598200 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr15:57589400-57598200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr15:57589600-57598200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:57589600-57598400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr15:57590000-57598200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr15:57590000-57598200 Weak transcription Pancreas Pancrea
23 chr15:57590800-57598200 Weak transcription Muscle Satellite Cultured Cells --
24 chr15:57591600-57598200 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr15:57592000-57598400 Weak transcription HSMMtube muscle
26 chr15:57592200-57598200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr15:57592200-57598400 Weak transcription HMEC breast
28 chr15:57592200-57598400 Weak transcription NHLF lung
29 chr15:57592400-57598200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr15:57592400-57598200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr15:57592400-57598400 Weak transcription Placenta Placenta
32 chr15:57592600-57598200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr15:57592600-57598200 Weak transcription Spleen Spleen
34 chr15:57593000-57598200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr15:57593800-57599200 Weak transcription Small Intestine intestine
36 chr15:57593800-57599400 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
37 chr15:57594000-57598200 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr15:57595000-57598200 Weak transcription Primary hematopoietic stem cells blood
39 chr15:57595200-57598600 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
40 chr15:57595400-57598200 Weak transcription H9 Cell Line embryonic stem cell
41 chr15:57595400-57598200 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr15:57595600-57598200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr15:57595600-57598200 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr15:57595600-57598200 Weak transcription HepG2 liver
45 chr15:57595800-57598200 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr15:57595800-57598200 Active TSS GM12878-XiMat blood
47 chr15:57595800-57598400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr15:57596200-57598600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr15:57596800-57598200 Enhancers Fetal Intestine Large intestine
50 chr15:57597000-57598200 Enhancers Fetal Intestine Small intestine

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