The 2.0 version of rSNPBase

Variant report

Variant rs59666456
Chromosome Location chr1:213256840-213256841
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213228800-213263200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
3 chr1:213233000-213262600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:213234800-213261000 Weak transcription Stomach Mucosa stomach
5 chr1:213240200-213272600 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:213240400-213261600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:213240600-213261200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:213241000-213259400 Weak transcription Brain Anterior Caudate brain
10 chr1:213241200-213261000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:213243000-213259800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:213243800-213262600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:213244000-213258400 Weak transcription Psoas Muscle Psoas
14 chr1:213244200-213257000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:213244200-213258200 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:213244200-213258200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:213244200-213258200 Weak transcription HUVEC blood vessel
18 chr1:213244200-213268000 Weak transcription Brain Substantia Nigra brain
19 chr1:213244200-213271000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:213244200-213273200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:213244200-213273200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:213244200-213296200 Weak transcription NHDF-Ad bronchial
23 chr1:213246600-213259400 Weak transcription Pancreas Pancrea
24 chr1:213246800-213283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:213249000-213258200 Weak transcription Fetal Kidney kidney
26 chr1:213251200-213259400 Weak transcription NHLF lung
27 chr1:213251200-213293000 Weak transcription NH-A brain
28 chr1:213251400-213257200 Weak transcription Fetal Brain Female brain
29 chr1:213251400-213258200 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr1:213251400-213263800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:213251600-213258200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:213251600-213259400 Weak transcription Spleen Spleen
33 chr1:213251600-213272000 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr1:213252400-213261000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:213252400-213264400 Weak transcription H9 Cell Line embryonic stem cell
36 chr1:213252600-213258000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr1:213252600-213262200 Strong transcription Primary monocytes fromperipheralblood blood
38 chr1:213252600-213297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:213252800-213257400 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr1:213252800-213257400 Strong transcription Fetal Stomach stomach
41 chr1:213252800-213262000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:213252800-213263600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:213253000-213263000 Weak transcription Colonic Mucosa Colon
44 chr1:213253000-213263200 Weak transcription Thymus Thymus
45 chr1:213253000-213271200 Weak transcription Small Intestine intestine
46 chr1:213253200-213260800 Weak transcription Fetal Thymus thymus
47 chr1:213253200-213262800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:213253200-213275600 Weak transcription Colon Smooth Muscle Colon
49 chr1:213253200-213277600 Weak transcription Gastric stomach
50 chr1:213253400-213257200 Strong transcription Liver Liver

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Last update: Aug 31, 2015