Variant report

Variant	rs59683641
Chromosome Location	chr5:167611262-167611263
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs73377493	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73379507	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73385749	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73385761	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73803840	1.00[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167592400-167626000	Weak transcription	HSMM	muscle
2	chr5:167600200-167613800	Weak transcription	Right Atrium	heart
3	chr5:167601200-167612000	Weak transcription	NHEK	skin
4	chr5:167603600-167617200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr5:167605200-167613800	Weak transcription	Fetal Brain Male	brain
6	chr5:167605600-167611600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr5:167606000-167613600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr5:167606400-167617200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr5:167606600-167611600	Weak transcription	Right Ventricle	heart
10	chr5:167606600-167626800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr5:167606800-167613200	Weak transcription	Fetal Heart	heart
12	chr5:167607000-167611800	Weak transcription	Left Ventricle	heart
13	chr5:167607200-167613200	Weak transcription	Fetal Stomach	stomach
14	chr5:167608400-167613600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr5:167608400-167616200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr5:167608600-167612600	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr5:167608600-167613400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr5:167608600-167613600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr5:167608600-167631800	Weak transcription	NH-A	brain
20	chr5:167609600-167619000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr5:167610000-167614000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr5:167610800-167612600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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