Variant report

Variant	rs73379507
Chromosome Location	chr5:167613458-167613459
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs59683641	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73377493	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73385749	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73385761	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73803840	1.00[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167592400-167626000	Weak transcription	HSMM	muscle
2	chr5:167600200-167613800	Weak transcription	Right Atrium	heart
3	chr5:167603600-167617200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr5:167605200-167613800	Weak transcription	Fetal Brain Male	brain
5	chr5:167606000-167613600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr5:167606400-167617200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr5:167606600-167626800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr5:167608400-167613600	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr5:167608400-167616200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr5:167608600-167613600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr5:167608600-167631800	Weak transcription	NH-A	brain
12	chr5:167609600-167619000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr5:167610000-167614000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr5:167612200-167613800	Weak transcription	Left Ventricle	heart
15	chr5:167612400-167613600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr5:167612400-167613800	Weak transcription	Right Ventricle	heart
17	chr5:167613200-167614600	Enhancers	Fetal Stomach	stomach
18	chr5:167613200-167615400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr5:167613200-167615400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr5:167613200-167615400	Strong transcription	NHEK	skin
21	chr5:167613200-167615800	Enhancers	Fetal Heart	heart
22	chr5:167613400-167614600	Enhancers	Fetal Brain Female	brain
23	chr5:167613400-167615600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr5:167613400-167615600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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