Variant report

Variant	rs59690002
Chromosome Location	chr6:25555900-25555901
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1358767	1.00[EUR][1000 genomes]
rs1410442	1.00[EUR][1000 genomes]
rs1410443	0.83[AFR][1000 genomes]
rs16890702	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1883256	1.00[EUR][1000 genomes]
rs1964805	1.00[EUR][1000 genomes]
rs212939	0.81[AFR][1000 genomes]
rs57183734	1.00[EUR][1000 genomes]
rs57345947	1.00[EUR][1000 genomes]
rs57684963	1.00[EUR][1000 genomes]
rs58035001	1.00[EUR][1000 genomes]
rs59062464	1.00[EUR][1000 genomes]
rs59403744	1.00[EUR][1000 genomes]
rs60689338	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs717224	1.00[EUR][1000 genomes]
rs876238	1.00[EUR][1000 genomes]
rs932317	1.00[EUR][1000 genomes]

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:25471600-25597200	Weak transcription	Gastric	stomach
2	chr6:25514200-25558400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr6:25516200-25556800	Weak transcription	Pancreas	Pancrea
4	chr6:25516400-25556800	Weak transcription	Fetal Stomach	stomach
5	chr6:25516800-25606400	Weak transcription	Lung	lung
6	chr6:25519800-25556800	Weak transcription	Ovary	ovary
7	chr6:25522400-25588600	Weak transcription	HMEC	breast
8	chr6:25523000-25577200	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr6:25530800-25584200	Weak transcription	Fetal Intestine Small	intestine
10	chr6:25538600-25563600	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr6:25538600-25592800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr6:25539000-25561200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr6:25539200-25582000	Weak transcription	Rectal Mucosa Donor 29	rectum
14	chr6:25539600-25556800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr6:25539600-25565200	Weak transcription	Aorta	Aorta
16	chr6:25539800-25558200	Weak transcription	Thymus	Thymus
17	chr6:25540600-25580200	Weak transcription	Fetal Thymus	thymus
18	chr6:25540800-25556800	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr6:25541400-25558600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr6:25541400-25576200	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr6:25541600-25584400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr6:25541600-25612000	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr6:25541800-25558400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr6:25542400-25563600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr6:25543800-25562000	Weak transcription	Adipose Nuclei	Adipose
26	chr6:25544000-25593600	Weak transcription	Fetal Lung	lung
27	chr6:25544600-25565000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr6:25547200-25600600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr6:25548800-25557000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr6:25551400-25559200	Weak transcription	Primary T cells from cord blood	blood
31	chr6:25551400-25565400	Weak transcription	Fetal Intestine Large	intestine
32	chr6:25553200-25556800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
33	chr6:25553800-25565200	Weak transcription	Duodenum Mucosa	Duodenum
34	chr6:25554200-25563800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr6:25554400-25558600	Weak transcription	NHDF-Ad	bronchial
36	chr6:25554400-25567600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr6:25555600-25556800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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