Variant report

Variant rs597072
Chromosome Location chr18:12033667-12033668
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:11996600-12035000 Weak transcription Primary T cells from cord blood blood
2 chr18:11996800-12034400 Weak transcription Primary B cells from cord blood blood
3 chr18:11997000-12034400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr18:11998400-12034000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr18:11999000-12034000 Strong transcription Primary monocytes fromperipheralblood blood
6 chr18:11999000-12035400 Strong transcription Primary neutrophils fromperipheralblood blood
7 chr18:11999200-12035800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr18:12016200-12038000 Weak transcription Brain Cingulate Gyrus brain
9 chr18:12017600-12038400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr18:12024200-12038400 Weak transcription Placenta Amnion Placenta Amnion
11 chr18:12027400-12033800 Strong transcription Hela-S3 cervix
12 chr18:12027400-12038400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr18:12028000-12034400 Strong transcription Sigmoid Colon Sigmoid Colon
14 chr18:12028200-12035200 Strong transcription Liver Liver
15 chr18:12028800-12034000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr18:12028800-12034200 Weak transcription Primary B cells from peripheral blood blood
17 chr18:12028800-12038200 Weak transcription Psoas Muscle Psoas
18 chr18:12028800-12038400 Weak transcription Right Atrium heart
19 chr18:12029000-12034600 Strong transcription Pancreas Pancrea
20 chr18:12029000-12036000 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr18:12029000-12037400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr18:12029000-12038000 Weak transcription HMEC breast
23 chr18:12029000-12038200 Weak transcription Rectal Smooth Muscle rectum
24 chr18:12029800-12034600 Strong transcription Skeletal Muscle Female skeletal muscle
25 chr18:12030200-12035000 Weak transcription Thymus Thymus
26 chr18:12030200-12038200 Weak transcription Ovary ovary
27 chr18:12030400-12034000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr18:12030600-12038000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr18:12030600-12038400 Weak transcription Lung lung
30 chr18:12030800-12038000 Weak transcription A549 lung
31 chr18:12031000-12035200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr18:12031200-12034000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr18:12031200-12035600 Weak transcription HepG2 liver
34 chr18:12031200-12038000 Weak transcription Colonic Mucosa Colon
35 chr18:12031200-12038200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr18:12031400-12033800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr18:12031400-12034000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr18:12031400-12035000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr18:12031400-12038000 Weak transcription H9 Cell Line embryonic stem cell
40 chr18:12031400-12038000 Weak transcription Fetal Intestine Large intestine
41 chr18:12031400-12038200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr18:12031400-12038200 Weak transcription Stomach Mucosa stomach
43 chr18:12031400-12038200 Weak transcription Spleen Spleen
44 chr18:12031400-12038800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr18:12031800-12034000 Strong transcription Fetal Muscle Leg muscle
46 chr18:12031800-12034000 Enhancers NHDF-Ad bronchial
47 chr18:12031800-12034000 Enhancers Osteobl bone
48 chr18:12031800-12038400 Weak transcription Aorta Aorta
49 chr18:12032000-12033800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr18:12032000-12033800 Enhancers NHLF lung

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