Variant report

Variant	rs59722277
Chromosome Location	chr10:25591062-25591063
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1413400	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1416993	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1416994	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56084254	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56257605	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58585465	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58942965	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59132240	0.89[ASN][1000 genomes]
rs60222304	0.90[AMR][1000 genomes]
rs60268096	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60876342	0.90[EUR][1000 genomes]
rs61082972	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61105987	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs66810403	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs66924755	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs66963587	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67389824	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67675896	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67709672	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67733590	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67963266	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67969515	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs68159928	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7093650	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7093651	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7093692	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73608266	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7476751	0.81[AMR][1000 genomes]
rs7904501	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25582000-25592000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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