Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:102350704..102352285-chr11:102355728..102357386,2	MCF-7	breast:
2	chr11:102328220..102330008-chr11:102355332..102358020,2	MCF-7	breast:
3	chr11:102354515..102357705-chr11:102357749..102361369,4	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11821503	1.00[EUR][1000 genomes]
rs11824853	1.00[AMR][1000 genomes]
rs11826339	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55971995	1.00[EUR][1000 genomes]
rs57366730	1.00[EUR][1000 genomes]
rs57688197	1.00[EUR][1000 genomes]
rs57879472	1.00[EUR][1000 genomes]
rs58716619	1.00[EUR][1000 genomes]
rs58874026	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58874629	1.00[EUR][1000 genomes]
rs58910901	1.00[EUR][1000 genomes]
rs59473983	1.00[EUR][1000 genomes]
rs60961163	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61525588	1.00[EUR][1000 genomes]
rs7112218	1.00[EUR][1000 genomes]
rs73591566	1.00[EUR][1000 genomes]
rs73591567	1.00[EUR][1000 genomes]
rs73591568	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73591585	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73593530	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73593547	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035567	chr11:102264516-102431607	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv469990	chr11:102335609-102413943	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv556150	chr11:102335609-102415859	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv468854	chr11:102336617-102413943	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv556151	chr11:102336617-102413943	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102341000-102359600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:102353400-102361400	Enhancers	HepG2	liver

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