The 2.0 version of rSNPBase

Variant report

Variant rs59786983
Chromosome Location chr4:2887375-2887376
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:2870200-2914000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr4:2871200-2896000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr4:2871200-2900600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr4:2872200-2890800 Weak transcription A549 lung
5 chr4:2874200-2900000 Weak transcription Hela-S3 cervix
6 chr4:2876400-2891600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr4:2876600-2889600 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr4:2876600-2919200 Strong transcription Primary B cells from peripheral blood blood
9 chr4:2876800-2889000 Strong transcription GM12878-XiMat blood
10 chr4:2876800-2889400 Strong transcription Primary monocytes fromperipheralblood blood
11 chr4:2876800-2891800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
12 chr4:2877000-2889800 Strong transcription Dnd41 blood
13 chr4:2877200-2891800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:2877200-2919400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr4:2877400-2889600 Strong transcription Liver Liver
16 chr4:2877400-2889600 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr4:2877400-2890000 Strong transcription Fetal Thymus thymus
18 chr4:2877400-2890200 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr4:2877400-2891800 Strong transcription Duodenum Mucosa Duodenum
20 chr4:2877600-2889600 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr4:2877600-2891400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr4:2877600-2891600 Strong transcription Primary T cells fromperipheralblood blood
23 chr4:2877800-2890800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr4:2877800-2891600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr4:2878000-2891200 Strong transcription Primary T helper cells PMA-I stimulated --
26 chr4:2879000-2889800 Strong transcription Primary B cells from cord blood blood
27 chr4:2880200-2887800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr4:2880200-2889600 Strong transcription Rectal Mucosa Donor 31 rectum
29 chr4:2880600-2889600 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr4:2880600-2915000 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr4:2881000-2887800 Strong transcription Left Ventricle heart
32 chr4:2881000-2889000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr4:2881000-2895600 Weak transcription Right Atrium heart
34 chr4:2881400-2889400 Strong transcription Stomach Smooth Muscle stomach
35 chr4:2881800-2887800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr4:2882200-2891400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr4:2883000-2892400 Strong transcription Fetal Intestine Small intestine
38 chr4:2883200-2888200 Strong transcription NHDF-Ad bronchial
39 chr4:2883200-2890000 Strong transcription Thymus Thymus
40 chr4:2883200-2891000 Strong transcription Fetal Intestine Large intestine
41 chr4:2883200-2891600 Strong transcription Fetal Lung lung
42 chr4:2883200-2891800 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr4:2883400-2888600 Strong transcription Fetal Brain Female brain
44 chr4:2883400-2889600 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr4:2883400-2890000 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr4:2883400-2891400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr4:2883400-2891800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:2883600-2888000 Strong transcription Fetal Muscle Leg muscle
49 chr4:2883600-2889000 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr4:2883600-2889200 Strong transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015