The 2.0 version of rSNPBase

Variant report

Variant rs59850480
Chromosome Location chr17:16158264-16158265
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16121000-16163200 Weak transcription Spleen Spleen
2 chr17:16121200-16158800 Weak transcription Left Ventricle heart
3 chr17:16121200-16159800 Weak transcription Lung lung
4 chr17:16121200-16163000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr17:16121400-16158600 Weak transcription Stomach Smooth Muscle stomach
6 chr17:16121400-16158800 Weak transcription Fetal Muscle Leg muscle
7 chr17:16121400-16159000 Weak transcription Fetal Muscle Trunk muscle
8 chr17:16121400-16170600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr17:16121600-16158400 Weak transcription Brain Hippocampus Middle brain
10 chr17:16121600-16158600 Weak transcription Brain Germinal Matrix brain
11 chr17:16121800-16158400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr17:16121800-16163200 Weak transcription Primary hematopoietic stem cells blood
13 chr17:16121800-16163200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr17:16122000-16163400 Weak transcription Fetal Brain Female brain
15 chr17:16126200-16163200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr17:16126200-16163400 Weak transcription Primary B cells from cord blood blood
17 chr17:16126400-16158800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr17:16127600-16158600 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr17:16132200-16163200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr17:16132400-16163600 Weak transcription HSMM muscle
21 chr17:16133800-16163000 Weak transcription Fetal Thymus thymus
22 chr17:16133800-16176200 Weak transcription NHEK skin
23 chr17:16134000-16170600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr17:16134200-16162400 Weak transcription Dnd41 blood
25 chr17:16134400-16163200 Weak transcription Thymus Thymus
26 chr17:16134800-16163200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr17:16135600-16158600 Weak transcription Adipose Nuclei Adipose
28 chr17:16138600-16163400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr17:16138600-16170200 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr17:16139000-16163400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr17:16139400-16163000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr17:16139600-16163400 Weak transcription Primary B cells from peripheral blood blood
33 chr17:16140000-16170200 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr17:16141400-16159000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr17:16143800-16160600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr17:16144000-16163000 Weak transcription Primary T cells fromperipheralblood blood
37 chr17:16147400-16158400 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr17:16147400-16158800 Weak transcription NH-A brain
39 chr17:16147400-16163200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr17:16147400-16167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr17:16147600-16158800 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr17:16147600-16158800 Weak transcription GM12878-XiMat blood
43 chr17:16147600-16158800 Weak transcription K562 blood
44 chr17:16147600-16163200 Weak transcription Primary T cells from cord blood blood
45 chr17:16148000-16159200 Weak transcription Small Intestine intestine
46 chr17:16150800-16158800 Weak transcription Pancreas Pancrea
47 chr17:16151600-16158800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr17:16151600-16160000 Weak transcription Aorta Aorta
49 chr17:16153800-16158600 Enhancers Rectal Mucosa Donor 31 rectum
50 chr17:16154400-16158400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015