The 2.0 version of rSNPBase

Variant report

Variant rs59871004
Chromosome Location chr11:10305810-10305811
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10278200-10309200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr11:10279000-10311400 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr11:10287600-10306200 Weak transcription Psoas Muscle Psoas
4 chr11:10290000-10313400 Weak transcription Fetal Brain Male brain
5 chr11:10290800-10309000 Weak transcription HSMMtube muscle
6 chr11:10291200-10313600 Weak transcription NHEK skin
7 chr11:10291200-10314400 Weak transcription HSMM muscle
8 chr11:10291400-10309000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr11:10294200-10309600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:10294200-10311400 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr11:10295600-10306600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr11:10295600-10307000 Weak transcription Colon Smooth Muscle Colon
13 chr11:10296800-10306600 Weak transcription NHDF-Ad bronchial
14 chr11:10297000-10306200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr11:10297000-10309600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr11:10297800-10309400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr11:10298200-10306000 Weak transcription A549 lung
18 chr11:10298200-10307000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr11:10298200-10313400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr11:10298400-10306200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr11:10299400-10308600 Weak transcription NHLF lung
22 chr11:10299400-10314800 Weak transcription Small Intestine intestine
23 chr11:10299600-10310400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr11:10299800-10314400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr11:10303400-10306600 Enhancers Liver Liver
26 chr11:10304000-10306800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:10304000-10312400 Weak transcription Duodenum Mucosa Duodenum
28 chr11:10304600-10307600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr11:10304800-10308800 Weak transcription Fetal Intestine Large intestine
30 chr11:10304800-10308800 Weak transcription Fetal Intestine Small intestine
31 chr11:10304800-10308800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr11:10305000-10306000 Weak transcription HepG2 liver
33 chr11:10305000-10308400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr11:10305200-10306000 Weak transcription Stomach Mucosa stomach
35 chr11:10305200-10306800 Weak transcription Hela-S3 cervix
36 chr11:10305400-10306200 Enhancers Primary neutrophils fromperipheralblood blood
37 chr11:10305400-10306600 Enhancers Monocytes-CD14+_RO01746 blood
38 chr11:10305600-10307600 Enhancers Adipose Nuclei Adipose
39 chr11:10305800-10306400 Enhancers Right Ventricle heart
40 chr11:10305800-10307800 Enhancers Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015