Variant report

Variant rs5996478
Chromosome Location chr22:23526401-23526402
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23523400-23527400 Flanking Active TSS Primary hematopoietic stem cells blood
2 chr22:23523600-23527400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
3 chr22:23523600-23527600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
4 chr22:23523600-23527800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr22:23523800-23526600 Flanking Active TSS Primary T cells from cord blood blood
6 chr22:23523800-23527000 Transcr. at gene 5' and 3' K562 blood
7 chr22:23524000-23526600 Flanking Active TSS Thymus Thymus
8 chr22:23524800-23527000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
9 chr22:23524800-23527600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr22:23525000-23526600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
11 chr22:23525000-23527000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
12 chr22:23525200-23527400 Enhancers Primary monocytes fromperipheralblood blood
13 chr22:23525200-23527400 Enhancers Fetal Lung lung
14 chr22:23525200-23527600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
15 chr22:23525200-23527600 Enhancers Spleen Spleen
16 chr22:23525200-23528400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr22:23525600-23526600 Active TSS Brain Anterior Caudate brain
18 chr22:23525600-23526800 Flanking Active TSS HUVEC blood vessel
19 chr22:23525600-23527400 Flanking Active TSS Brain Germinal Matrix brain
20 chr22:23525600-23527400 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr22:23525600-23527800 Enhancers Gastric stomach
22 chr22:23525600-23530200 Enhancers Primary B cells from peripheral blood blood
23 chr22:23525800-23526800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr22:23525800-23527000 Enhancers Skeletal Muscle Female skeletal muscle
25 chr22:23525800-23527200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr22:23525800-23527400 Enhancers Fetal Intestine Large intestine
27 chr22:23525800-23527400 Bivalent Enhancer Fetal Muscle Trunk muscle
28 chr22:23525800-23527600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
29 chr22:23525800-23530200 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr22:23525800-23530600 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr22:23526000-23526600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr22:23526000-23526600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr22:23526000-23526800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr22:23526000-23526800 Weak transcription Lung lung
35 chr22:23526000-23527000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr22:23526000-23527000 Enhancers Fetal Thymus thymus
37 chr22:23526000-23527000 Flanking Active TSS HepG2 liver
38 chr22:23526000-23527200 Enhancers Primary neutrophils fromperipheralblood blood
39 chr22:23526000-23527200 Genic enhancers Fetal Stomach stomach
40 chr22:23526000-23527200 Enhancers Rectal Mucosa Donor 31 rectum
41 chr22:23526000-23527200 Flanking Active TSS HSMMtube muscle
42 chr22:23526000-23527400 Bivalent Enhancer Fetal Muscle Leg muscle
43 chr22:23526000-23527600 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr22:23526000-23527600 Genic enhancers Fetal Intestine Small intestine
45 chr22:23526000-23527600 Enhancers Placenta Placenta
46 chr22:23526000-23528200 Enhancers Primary B cells from cord blood blood
47 chr22:23526000-23528400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr22:23526000-23528400 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr22:23526000-23528400 Enhancers Pancreas Pancrea
50 chr22:23526000-23529600 Enhancers Liver Liver

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