Variant report

Variant rs6003540
Chromosome Location chr22:23521698-23521699
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23490400-23522000 Weak transcription Aorta Aorta
2 chr22:23516000-23522000 Enhancers Primary T cells fromperipheralblood blood
3 chr22:23517800-23522000 Weak transcription Placenta Amnion Placenta Amnion
4 chr22:23517800-23522200 Enhancers GM12878-XiMat blood
5 chr22:23518000-23522000 Enhancers Esophagus oesophagus
6 chr22:23518000-23522200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr22:23519200-23522200 Enhancers Primary B cells from peripheral blood blood
8 chr22:23519400-23522000 Weak transcription Thymus Thymus
9 chr22:23519400-23522200 Enhancers Primary neutrophils fromperipheralblood blood
10 chr22:23519600-23521800 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr22:23519600-23522000 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr22:23519600-23522000 Enhancers Placenta Placenta
13 chr22:23519600-23522200 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr22:23519800-23522000 Weak transcription H9 Cell Line embryonic stem cell
15 chr22:23519800-23522000 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr22:23519800-23522200 Enhancers Primary B cells from cord blood blood
17 chr22:23520200-23521800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr22:23520600-23521800 Enhancers Brain Anterior Caudate brain
19 chr22:23520600-23521800 Enhancers Brain Hippocampus Middle brain
20 chr22:23520600-23522000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr22:23520600-23522000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr22:23520600-23522000 Enhancers Primary T helper cells fromperipheralblood blood
23 chr22:23520600-23522000 Enhancers Brain Cingulate Gyrus brain
24 chr22:23520600-23522000 Bivalent Enhancer Fetal Muscle Trunk muscle
25 chr22:23520600-23522000 Enhancers Pancreas Pancrea
26 chr22:23520600-23522200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr22:23520600-23522200 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr22:23520600-23522200 Bivalent Enhancer Fetal Muscle Leg muscle
29 chr22:23520600-23522200 Enhancers Fetal Thymus thymus
30 chr22:23520600-23522400 Flanking Active TSS Stomach Smooth Muscle stomach
31 chr22:23520800-23521800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr22:23520800-23521800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr22:23520800-23521800 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr22:23520800-23521800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr22:23520800-23521800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr22:23520800-23521800 Enhancers Adipose Nuclei Adipose
37 chr22:23520800-23521800 Enhancers Liver Liver
38 chr22:23520800-23521800 Enhancers Rectal Mucosa Donor 31 rectum
39 chr22:23520800-23521800 Enhancers Rectal Smooth Muscle rectum
40 chr22:23520800-23521800 Enhancers Dnd41 blood
41 chr22:23520800-23521800 Flanking Active TSS HepG2 liver
42 chr22:23520800-23522000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr22:23520800-23522000 Enhancers HUES6 Cell Line embryonic stem cell
44 chr22:23520800-23522000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr22:23520800-23522000 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr22:23520800-23522000 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr22:23520800-23522000 Enhancers Muscle Satellite Cultured Cells --
48 chr22:23520800-23522000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr22:23520800-23522000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr22:23520800-23522000 Enhancers Brain Substantia Nigra brain

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