Variant report

Variant rs5996477
Chromosome Location chr22:23520846-23520847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23490400-23522000 Weak transcription Aorta Aorta
2 chr22:23516000-23522000 Enhancers Primary T cells fromperipheralblood blood
3 chr22:23517000-23521000 Weak transcription Brain Angular Gyrus brain
4 chr22:23517800-23522000 Weak transcription Placenta Amnion Placenta Amnion
5 chr22:23517800-23522200 Enhancers GM12878-XiMat blood
6 chr22:23518000-23521200 Strong transcription Right Atrium heart
7 chr22:23518000-23522000 Enhancers Esophagus oesophagus
8 chr22:23518000-23522200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr22:23519000-23521600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr22:23519200-23521400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr22:23519200-23522200 Enhancers Primary B cells from peripheral blood blood
12 chr22:23519400-23522000 Weak transcription Thymus Thymus
13 chr22:23519400-23522200 Enhancers Primary neutrophils fromperipheralblood blood
14 chr22:23519600-23521400 Weak transcription H1 Cell Line embryonic stem cell
15 chr22:23519600-23521400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr22:23519600-23521800 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr22:23519600-23522000 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr22:23519600-23522000 Enhancers Placenta Placenta
19 chr22:23519600-23522200 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr22:23519800-23521000 Enhancers K562 blood
21 chr22:23519800-23521200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr22:23519800-23522000 Weak transcription H9 Cell Line embryonic stem cell
23 chr22:23519800-23522000 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr22:23519800-23522200 Enhancers Primary B cells from cord blood blood
25 chr22:23520200-23521200 Weak transcription Primary hematopoietic stem cells blood
26 chr22:23520200-23521800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr22:23520600-23521000 Enhancers Primary T helper cells PMA-I stimulated --
28 chr22:23520600-23521000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr22:23520600-23521200 Enhancers Brain Inferior Temporal Lobe brain
30 chr22:23520600-23521200 Enhancers Colonic Mucosa Colon
31 chr22:23520600-23521400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr22:23520600-23521400 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr22:23520600-23521600 Enhancers Brain Germinal Matrix brain
34 chr22:23520600-23521600 Enhancers Colon Smooth Muscle Colon
35 chr22:23520600-23521600 Enhancers Fetal Stomach stomach
36 chr22:23520600-23521800 Enhancers Brain Anterior Caudate brain
37 chr22:23520600-23521800 Enhancers Brain Hippocampus Middle brain
38 chr22:23520600-23522000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr22:23520600-23522000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr22:23520600-23522000 Enhancers Primary T helper cells fromperipheralblood blood
41 chr22:23520600-23522000 Enhancers Brain Cingulate Gyrus brain
42 chr22:23520600-23522000 Bivalent Enhancer Fetal Muscle Trunk muscle
43 chr22:23520600-23522000 Enhancers Pancreas Pancrea
44 chr22:23520600-23522200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr22:23520600-23522200 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr22:23520600-23522200 Bivalent Enhancer Fetal Muscle Leg muscle
47 chr22:23520600-23522200 Enhancers Fetal Thymus thymus
48 chr22:23520600-23522400 Flanking Active TSS Stomach Smooth Muscle stomach
49 chr22:23520800-23521000 Enhancers iPS-20b Cell Line embryonic stem cell
50 chr22:23520800-23521000 Enhancers Fetal Heart heart

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