Variant report

Variant rs6003542
Chromosome Location chr22:23524589-23524590
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23522000-23525000 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
2 chr22:23522000-23525800 Transcr. at gene 5' and 3' Right Atrium heart
3 chr22:23522400-23524800 Active TSS H9 Cell Line embryonic stem cell
4 chr22:23522400-23525000 Active TSS HSMMtube muscle
5 chr22:23522400-23525800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr22:23522400-23526400 Active TSS Pancreatic Islets Pancreatic Islet
7 chr22:23522600-23524600 Active TSS HSMM muscle
8 chr22:23522600-23524800 Active TSS HUVEC blood vessel
9 chr22:23523000-23525400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
10 chr22:23523000-23526000 Flanking Active TSS Primary B cells from cord blood blood
11 chr22:23523200-23524600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
12 chr22:23523200-23524600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr22:23523200-23524600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
14 chr22:23523200-23524600 Active TSS Primary T killer memory cells from peripheral blood blood
15 chr22:23523200-23524600 Enhancers Fetal Heart heart
16 chr22:23523200-23525000 Flanking Active TSS Colonic Mucosa Colon
17 chr22:23523200-23525000 Transcr. at gene 5' and 3' NHLF lung
18 chr22:23523200-23525800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr22:23523200-23526000 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr22:23523400-23525000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
21 chr22:23523400-23525600 Flanking Active TSS Right Ventricle heart
22 chr22:23523400-23527400 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr22:23523600-23524600 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
24 chr22:23523600-23524600 Transcr. at gene 5' and 3' Esophagus oesophagus
25 chr22:23523600-23524600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
26 chr22:23523600-23524600 Flanking Bivalent TSS/Enh Fetal Stomach stomach
27 chr22:23523600-23524800 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
28 chr22:23523600-23524800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr22:23523600-23524800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
30 chr22:23523600-23525200 Transcr. at gene 5' and 3' H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr22:23523600-23525200 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
32 chr22:23523600-23525200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
33 chr22:23523600-23525200 Flanking Active TSS Sigmoid Colon Sigmoid Colon
34 chr22:23523600-23525200 Flanking Active TSS Spleen Spleen
35 chr22:23523600-23525400 Flanking Active TSS Rectal Smooth Muscle rectum
36 chr22:23523600-23525800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
37 chr22:23523600-23525800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
38 chr22:23523600-23525800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
39 chr22:23523600-23525800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
40 chr22:23523600-23526000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr22:23523600-23526000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
42 chr22:23523600-23526000 Flanking Active TSS Primary T cells fromperipheralblood blood
43 chr22:23523600-23526000 Flanking Active TSS Liver Liver
44 chr22:23523600-23526000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
45 chr22:23523600-23526000 Flanking Active TSS Placenta Placenta
46 chr22:23523600-23526000 Flanking Active TSS Ovary ovary
47 chr22:23523600-23526000 Flanking Active TSS NH-A brain
48 chr22:23523600-23526200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr22:23523600-23526200 Flanking Active TSS Adipose Nuclei Adipose
50 chr22:23523600-23526200 Flanking Active TSS Duodenum Mucosa Duodenum

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