The 2.0 version of rSNPBase

Variant report

Variant rs5997728
Chromosome Location chr22:31053658-31053659
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31033400-31058200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr22:31033600-31058000 Weak transcription Adipose Nuclei Adipose
3 chr22:31033600-31058000 Weak transcription Fetal Lung lung
4 chr22:31033800-31057600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr22:31034000-31059400 Weak transcription Aorta Aorta
6 chr22:31034200-31057800 Weak transcription Colon Smooth Muscle Colon
7 chr22:31034200-31058800 Weak transcription Rectal Smooth Muscle rectum
8 chr22:31040200-31060800 Weak transcription Fetal Brain Male brain
9 chr22:31040600-31055800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr22:31043600-31055400 Weak transcription Fetal Stomach stomach
11 chr22:31044200-31057600 Weak transcription Ovary ovary
12 chr22:31044200-31058000 Weak transcription Stomach Smooth Muscle stomach
13 chr22:31045200-31062800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr22:31045400-31057600 Weak transcription Colonic Mucosa Colon
15 chr22:31045400-31057600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr22:31045400-31062800 Weak transcription Placenta Amnion Placenta Amnion
17 chr22:31045400-31062800 Weak transcription NH-A brain
18 chr22:31045600-31058200 Weak transcription Primary hematopoietic stem cells blood
19 chr22:31045600-31062800 Weak transcription HSMMtube muscle
20 chr22:31045800-31057600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr22:31045800-31057800 Weak transcription Duodenum Mucosa Duodenum
22 chr22:31045800-31061400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr22:31045800-31062200 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr22:31046000-31054800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr22:31046000-31057600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr22:31046000-31057600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr22:31046000-31057600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr22:31046000-31057600 Weak transcription NHDF-Ad bronchial
29 chr22:31046000-31057800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr22:31046000-31057800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr22:31046000-31057800 Weak transcription Osteobl bone
32 chr22:31046000-31058000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr22:31046000-31058400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr22:31046000-31062000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr22:31046000-31062200 Weak transcription Muscle Satellite Cultured Cells --
36 chr22:31046000-31062600 Weak transcription HMEC breast
37 chr22:31046000-31062600 Weak transcription NHLF lung
38 chr22:31046800-31057600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr22:31046800-31057600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr22:31046800-31057600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr22:31046800-31062000 Weak transcription Stomach Mucosa stomach
42 chr22:31047000-31055800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr22:31047000-31057600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr22:31047000-31057600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr22:31047000-31057600 Weak transcription Fetal Intestine Large intestine
46 chr22:31047000-31057600 Weak transcription Fetal Muscle Leg muscle
47 chr22:31047000-31057800 Weak transcription Primary B cells from peripheral blood blood
48 chr22:31047000-31057800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr22:31047000-31058000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr22:31047000-31058200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015