Variant report

Variant rs5998662
Chromosome Location chr22:21964002-21964003
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21937800-21965400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr22:21939600-21983200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr22:21946400-21980200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr22:21948800-21965200 Weak transcription Fetal Kidney kidney
5 chr22:21949200-21976600 Weak transcription Fetal Brain Male brain
6 chr22:21949400-21965400 Weak transcription Hela-S3 cervix
7 chr22:21949600-21965200 Weak transcription Colon Smooth Muscle Colon
8 chr22:21949800-21965200 Weak transcription Brain Anterior Caudate brain
9 chr22:21949800-21965400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr22:21949800-21965400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr22:21949800-21968800 Weak transcription Stomach Mucosa stomach
12 chr22:21950000-21965200 Weak transcription H9 Cell Line embryonic stem cell
13 chr22:21950000-21965200 Weak transcription Rectal Smooth Muscle rectum
14 chr22:21950000-21965400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:21950000-21978600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr22:21950200-21965200 Weak transcription H1 Cell Line embryonic stem cell
17 chr22:21950200-21965200 Weak transcription NH-A brain
18 chr22:21950200-21965400 Weak transcription Placenta Amnion Placenta Amnion
19 chr22:21950600-21964400 Weak transcription Fetal Brain Female brain
20 chr22:21950600-21965200 Weak transcription Fetal Lung lung
21 chr22:21950600-21965400 Weak transcription Aorta Aorta
22 chr22:21950800-21964400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr22:21951200-21964400 Weak transcription NHLF lung
24 chr22:21951200-21964600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr22:21951200-21964600 Weak transcription Muscle Satellite Cultured Cells --
26 chr22:21951200-21965000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr22:21951200-21965400 Weak transcription Brain Cingulate Gyrus brain
28 chr22:21951400-21965200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr22:21951800-21964200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr22:21952000-21964200 Weak transcription Osteobl bone
31 chr22:21952800-21965400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr22:21953800-21964400 Weak transcription Liver Liver
33 chr22:21953800-21964400 Weak transcription Brain Angular Gyrus brain
34 chr22:21954000-21965200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr22:21954000-21965400 Weak transcription Brain Substantia Nigra brain
36 chr22:21954200-21964400 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr22:21954200-21964400 Weak transcription NHDF-Ad bronchial
38 chr22:21957000-21964400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr22:21957000-21965200 Weak transcription HSMM muscle
40 chr22:21957000-21965400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr22:21957200-21964400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr22:21957200-21965400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr22:21957200-21965600 Weak transcription HSMMtube muscle
44 chr22:21957400-21964200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr22:21957400-21964400 Weak transcription Duodenum Mucosa Duodenum
46 chr22:21957400-21964800 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr22:21957400-21965200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr22:21957400-21965800 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr22:21958800-21964200 Weak transcription Primary hematopoietic stem cells blood
50 chr22:21959000-21981200 Strong transcription Dnd41 blood

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