Variant report

Variant	rs60115459
Chromosome Location	chr7:96454150-96454151
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2922964	0.97[AFR][1000 genomes]
rs59438783	1.00[AMR][1000 genomes]
rs61753628	1.00[EUR][1000 genomes]
rs73708825	1.00[AMR][1000 genomes]
rs73708832	1.00[AMR][1000 genomes]
rs73708835	1.00[AMR][1000 genomes]
rs73708837	1.00[AMR][1000 genomes]
rs73708842	1.00[AMR][1000 genomes]
rs73710720	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5857	chr7:96440164-96494110	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv5	chr7:96451352-96494110	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96452600-96454600	Enhancers	Fetal Brain Female	brain
2	chr7:96454000-96454800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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