The 2.0 version of rSNPBase

Variant report

Variant rs60121328
Chromosome Location chr18:44000155-44000156
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43985200-44000600 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr18:43992600-44001600 Weak transcription Fetal Thymus thymus
3 chr18:43994200-44011600 Weak transcription Fetal Brain Female brain
4 chr18:43994800-44015400 Weak transcription Fetal Brain Male brain
5 chr18:43995800-44011600 Weak transcription Thymus Thymus
6 chr18:43998200-44005200 Enhancers Fetal Muscle Leg muscle
7 chr18:43998400-44000400 Enhancers Fetal Heart heart
8 chr18:43998600-44000200 Enhancers K562 blood
9 chr18:43998600-44000400 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr18:43998600-44000400 Enhancers iPS-20b Cell Line embryonic stem cell
11 chr18:43998800-44000200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr18:43998800-44000200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr18:43998800-44000400 Enhancers ES-WA7 Cell Line embryonic stem cell
14 chr18:43998800-44000400 Enhancers H9 Cell Line embryonic stem cell
15 chr18:43998800-44000400 Enhancers Liver Liver
16 chr18:43998800-44000600 Enhancers H1 Cell Line embryonic stem cell
17 chr18:43998800-44001600 Weak transcription Small Intestine intestine
18 chr18:43999000-44000200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:43999000-44000200 Enhancers HUES6 Cell Line embryonic stem cell
20 chr18:43999000-44000200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
21 chr18:43999000-44000200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
22 chr18:43999000-44000400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr18:43999000-44000400 Enhancers Fetal Muscle Trunk muscle
24 chr18:43999000-44002400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr18:43999000-44011600 Weak transcription Fetal Lung lung
26 chr18:43999200-44000200 Enhancers Left Ventricle heart
27 chr18:43999200-44000200 Enhancers Right Atrium heart
28 chr18:43999200-44000400 Enhancers HUES48 Cell Line embryonic stem cell
29 chr18:43999400-44005600 Enhancers Skeletal Muscle Female skeletal muscle
30 chr18:43999400-44013000 Weak transcription Brain Germinal Matrix brain
31 chr18:43999600-44004400 Weak transcription Fetal Stomach stomach
32 chr18:43999800-44000600 Genic enhancers Spleen Spleen
33 chr18:43999800-44001000 Weak transcription Psoas Muscle Psoas
34 chr18:43999800-44001400 Weak transcription Adipose Nuclei Adipose
35 chr18:43999800-44001800 Weak transcription GM12878-XiMat blood
36 chr18:43999800-44002000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr18:43999800-44002400 Weak transcription Esophagus oesophagus
38 chr18:43999800-44004200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr18:43999800-44004200 Weak transcription Right Ventricle heart
40 chr18:43999800-44004800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr18:43999800-44005400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr18:43999800-44005600 Enhancers Skeletal Muscle Male skeletal muscle
43 chr18:43999800-44030200 Weak transcription Stomach Smooth Muscle stomach
44 chr18:44000000-44004000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr18:44000000-44004200 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr18:44000000-44004200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr18:44000000-44005400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015