Variant report

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10440849	0.83[EUR][1000 genomes]
rs5011191	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56003919	0.84[EUR][1000 genomes]
rs59419160	0.86[EUR][1000 genomes]
rs6901139	0.83[EUR][1000 genomes]
rs72957255	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72966310	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72966320	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72970757	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72978508	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7741358	0.86[EUR][1000 genomes]
rs7752291	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7761418	0.81[EUR][1000 genomes]
rs7767652	0.83[EUR][1000 genomes]
rs9464190	0.94[EUR][1000 genomes]
rs9475166	0.83[EUR][1000 genomes]
rs9475168	0.81[EUR][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54877200-54881200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr6:54878400-54880000	Enhancers	Fetal Lung	lung
3	chr6:54878600-54880000	Enhancers	Fetal Brain Female	brain
4	chr6:54878800-54880000	Enhancers	Fetal Brain Male	brain
5	chr6:54879000-54880000	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr6:54879000-54880000	Enhancers	Stomach Mucosa	stomach
7	chr6:54879200-54879800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr6:54879200-54879800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr6:54879200-54879800	Enhancers	Fetal Heart	heart
10	chr6:54879400-54879800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr6:54879400-54879800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr6:54879400-54879800	Enhancers	Aorta	Aorta
13	chr6:54879400-54880000	Enhancers	Fetal Stomach	stomach
14	chr6:54879400-54881400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:54879600-54879800	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr6:54879600-54879800	Enhancers	Small Intestine	intestine
17	chr6:54879600-54880000	Enhancers	Fetal Intestine Large	intestine
18	chr6:54879600-54880000	Enhancers	Right Atrium	heart
19	chr6:54879600-54880800	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr6:54879600-54880800	Weak transcription	Rectal Mucosa Donor 31	rectum

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