Variant report

Variant	rs7767652
Chromosome Location	chr6:55006797-55006798
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10440849	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56003919	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs59419160	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs60139657	0.83[EUR][1000 genomes]
rs6901139	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72966310	0.81[EUR][1000 genomes]
rs72966320	0.84[EUR][1000 genomes]
rs72970757	0.86[EUR][1000 genomes]
rs72978508	0.87[EUR][1000 genomes]
rs72978515	0.89[EUR][1000 genomes]
rs7741358	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7761418	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9464190	1.00[JPT][hapmap];0.90[MKK][hapmap];0.89[TSI][hapmap];0.88[YRI][hapmap];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9475164	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9475165	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9475166	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9475168	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:55005400-55009600	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr6:55006200-55007000	Enhancers	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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