Variant report

Variant	rs60157682
Chromosome Location	chr14:69200158-69200159
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69199814..69201637-chr14:69202676..69204761,2	K562	blood:
2	chr14:69195838..69197369-chr14:69197618..69200440,2	K562	blood:
3	chr14:69195069..69196789-chr14:69199130..69200741,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000207089	Chromatin interaction

rs_ID	r²[population]
rs11847011	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4902639	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60050063	0.83[AMR][1000 genomes]
rs60206617	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr14:69193000-69200800	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr14:69195200-69201600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:69195600-69200200	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr14:69195600-69202800	Weak transcription	Fetal Kidney	kidney
6	chr14:69196000-69200800	Weak transcription	Duodenum Mucosa	Duodenum
7	chr14:69196200-69200400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr14:69196400-69200800	Weak transcription	Small Intestine	intestine
9	chr14:69196400-69201600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr14:69196400-69203600	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr14:69196600-69200200	Enhancers	Brain Hippocampus Middle	brain
12	chr14:69196600-69201000	Weak transcription	Fetal Intestine Small	intestine
13	chr14:69196600-69201000	Weak transcription	Rectal Mucosa Donor 31	rectum
14	chr14:69196600-69203200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:69196800-69200600	Weak transcription	HUVEC	blood vessel
16	chr14:69196800-69201000	Weak transcription	K562	blood
17	chr14:69197400-69201200	Enhancers	Brain Anterior Caudate	brain
18	chr14:69197800-69200200	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr14:69197800-69202200	Enhancers	Primary monocytes fromperipheralblood	blood
20	chr14:69198000-69200200	Weak transcription	Right Atrium	heart
21	chr14:69198200-69203000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr14:69198200-69203000	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr14:69198400-69200200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr14:69198400-69200200	Weak transcription	Left Ventricle	heart
25	chr14:69198400-69200800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr14:69198400-69201200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr14:69198400-69202400	Weak transcription	Ovary	ovary
28	chr14:69198400-69203400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr14:69198400-69214000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr14:69198600-69201200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr14:69198600-69202400	Weak transcription	HSMMtube	muscle
32	chr14:69198600-69203000	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr14:69198800-69201000	Weak transcription	Fetal Brain Female	brain
34	chr14:69198800-69201000	Weak transcription	Fetal Lung	lung
35	chr14:69198800-69202200	Enhancers	Primary hematopoietic stem cells	blood
36	chr14:69198800-69202800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
37	chr14:69198800-69203200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr14:69199000-69200200	Weak transcription	Fetal Stomach	stomach
39	chr14:69199000-69201800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
40	chr14:69199000-69202800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
41	chr14:69199000-69203000	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr14:69199000-69203600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr14:69199200-69200200	Weak transcription	Brain Cingulate Gyrus	brain
44	chr14:69199200-69202800	Weak transcription	HepG2	liver
45	chr14:69199200-69204400	Enhancers	Brain Germinal Matrix	brain
46	chr14:69199400-69202000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr14:69199400-69203800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
48	chr14:69199600-69202000	Enhancers	Primary T cells from cord blood	blood
49	chr14:69199600-69206800	Enhancers	Fetal Muscle Leg	muscle
50	chr14:69199800-69200200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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