Variant report

Variant	rs4902639
Chromosome Location	chr14:69198443-69198444
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69195838..69197369-chr14:69197618..69200440,2	K562	blood:
2	chr14:69197485..69199211-chr14:69252753..69254670,2	MCF-7	breast:
3	chr14:69196911..69199506-chr14:69233921..69236013,2	MCF-7	breast:
4	chr14:69196833..69200106-chr14:69259441..69263814,4	K562	blood:
5	chr14:69195777..69198921-chr14:69260739..69263814,4	K562	blood:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

rs_ID	r²[population]
rs11847011	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1275049	0.89[YRI][hapmap]
rs194785	0.85[YRI][hapmap]
rs60050063	0.83[AMR][1000 genomes]
rs60157682	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60206617	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr14:69187400-69200000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr14:69187800-69199400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr14:69193000-69200800	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr14:69194200-69199200	Enhancers	Fetal Muscle Leg	muscle
6	chr14:69194800-69199400	Enhancers	Fetal Heart	heart
7	chr14:69195200-69201600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr14:69195400-69199800	Weak transcription	Primary T helper cells fromperipheralblood	blood
9	chr14:69195600-69200200	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr14:69195600-69202800	Weak transcription	Fetal Kidney	kidney
11	chr14:69196000-69200800	Weak transcription	Duodenum Mucosa	Duodenum
12	chr14:69196200-69200400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr14:69196400-69200800	Weak transcription	Small Intestine	intestine
14	chr14:69196400-69201600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr14:69196400-69203600	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chr14:69196600-69198800	Enhancers	Fetal Lung	lung
17	chr14:69196600-69200200	Enhancers	Brain Hippocampus Middle	brain
18	chr14:69196600-69201000	Weak transcription	Fetal Intestine Small	intestine
19	chr14:69196600-69201000	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr14:69196600-69203200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr14:69196800-69198800	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr14:69196800-69199400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr14:69196800-69200600	Weak transcription	HUVEC	blood vessel
24	chr14:69196800-69201000	Weak transcription	K562	blood
25	chr14:69197000-69198600	Enhancers	HSMMtube	muscle
26	chr14:69197000-69198800	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr14:69197000-69199000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr14:69197000-69199000	Enhancers	Fetal Stomach	stomach
29	chr14:69197000-69199200	Enhancers	HepG2	liver
30	chr14:69197000-69199400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr14:69197000-69200000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
32	chr14:69197000-69200000	Weak transcription	Brain Substantia Nigra	brain
33	chr14:69197200-69198600	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr14:69197200-69198600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
35	chr14:69197200-69199000	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr14:69197400-69198600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr14:69197400-69198600	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr14:69197400-69198600	Enhancers	Adipose Nuclei	Adipose
39	chr14:69197400-69199000	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr14:69197400-69201200	Enhancers	Brain Anterior Caudate	brain
41	chr14:69197600-69198600	Enhancers	H1 Cell Line	embryonic stem cell
42	chr14:69197600-69199000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr14:69197600-69199800	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr14:69197600-69200000	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr14:69197800-69198600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
46	chr14:69197800-69198600	Flanking Active TSS	Brain Germinal Matrix	brain
47	chr14:69197800-69199000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
48	chr14:69197800-69199800	Weak transcription	Fetal Thymus	thymus
49	chr14:69197800-69200200	Enhancers	Monocytes-CD14+_RO01746	blood
50	chr14:69197800-69202200	Enhancers	Primary monocytes fromperipheralblood	blood

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