Variant report

Variant	rs1275049
Chromosome Location	chr14:69184322-69184323
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:69183344..69185118-chr14:69281326..69283453,2	K562	blood:
2	chr14:69179231..69184883-chr14:69249659..69253927,5	MCF-7	breast:
3	chr14:69177353..69180926-chr14:69182112..69186555,4	MCF-7	breast:
4	chr14:69182476..69185468-chr14:69260401..69263211,2	MCF-7	breast:
5	chr14:69182299..69185651-chr14:69257654..69260902,5	K562	blood:
6	chr14:69181891..69185651-chr14:69255662..69261026,8	K562	blood:
7	chr14:69183888..69188009-chr14:69213725..69217312,4	K562	blood:
8	chr14:69182928..69185621-chr14:69189406..69191992,2	MCF-7	breast:
9	chr14:69027252..69028985-chr14:69183923..69186800,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11847011	0.89[YRI][hapmap]
rs194771	1.00[GIH][hapmap];0.88[MEX][hapmap];0.92[TSI][hapmap]
rs194774	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs194775	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs194785	1.00[ASW][hapmap];1.00[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.92[TSI][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs438354	0.82[CEU][hapmap];1.00[EUR][1000 genomes]
rs450420	0.82[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4902639	0.89[YRI][hapmap]
rs7151054	1.00[MEX][hapmap]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69194200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
3	chr14:69176600-69189400	Weak transcription	Pancreas	Pancrea
4	chr14:69180000-69185200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr14:69180200-69185400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr14:69180800-69185200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr14:69180800-69185200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr14:69180800-69186200	Weak transcription	Primary T cells from cord blood	blood
9	chr14:69180800-69186200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
10	chr14:69181000-69185200	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr14:69181000-69186000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr14:69181000-69191400	Weak transcription	Fetal Muscle Trunk	muscle
13	chr14:69181000-69195200	Weak transcription	Spleen	Spleen
14	chr14:69181200-69184800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr14:69181600-69184400	Enhancers	Fetal Intestine Small	intestine
16	chr14:69181800-69185000	Weak transcription	NHDF-Ad	bronchial
17	chr14:69181800-69185800	Enhancers	HepG2	liver
18	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr14:69182200-69185000	Weak transcription	Osteobl	bone
20	chr14:69182200-69185200	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr14:69182200-69191200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr14:69182400-69185200	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr14:69182600-69185200	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr14:69183400-69184400	Enhancers	Fetal Intestine Large	intestine
25	chr14:69183400-69184800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr14:69184000-69184400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr14:69184000-69184600	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr14:69184000-69185000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
29	chr14:69184200-69184600	Enhancers	Ovary	ovary
30	chr14:69184200-69185200	Weak transcription	K562	blood
31	chr14:69184200-69185600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr14:69184200-69188600	Weak transcription	Placenta	Placenta

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