Variant report

Variant	rs7151054
Chromosome Location	chr14:69219896-69219897
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69218946..69221608-chr14:69261319..69263953,3	K562	blood:
2	chr14:69218982..69221313-chr14:69251306..69253828,3	MCF-7	breast:
3	chr14:69217090..69220380-chr14:69222883..69225939,5	K562	blood:
4	chr14:69218627..69226949-chr14:69256316..69264627,15	K562	blood:
5	chr14:69217466..69219911-chr14:69223716..69225939,2	K562	blood:
6	chr14:69218392..69222531-chr14:69227666..69230740,3	K562	blood:
7	chr14:69219042..69221394-chr14:69250873..69253733,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11844909	0.82[YRI][hapmap]
rs1274937	0.85[EUR][1000 genomes]
rs1275049	1.00[MEX][hapmap]
rs168966	0.85[EUR][1000 genomes]
rs194771	0.88[MEX][hapmap];0.84[TSI][hapmap];0.85[EUR][1000 genomes]
rs194774	0.85[EUR][1000 genomes]
rs194785	1.00[MEX][hapmap];0.84[TSI][hapmap];0.85[EUR][1000 genomes]
rs450420	1.00[MEX][hapmap]
rs4899257	0.85[CHB][hapmap];0.82[JPT][hapmap]
rs8016829	0.82[CHB][hapmap]
rs8021099	0.92[YRI][hapmap]
rs9635254	0.82[CHB][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523795	chr14:69216412-69219896	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv456332	chr14:69216412-69230080	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv564963	chr14:69216412-69230080	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69201200-69222600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:69202800-69224600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr14:69212600-69229200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:69214400-69221000	Weak transcription	Right Atrium	heart
5	chr14:69214600-69224600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr14:69215600-69222400	Weak transcription	Pancreas	Pancrea
7	chr14:69215800-69221000	Weak transcription	Spleen	Spleen
8	chr14:69215800-69222400	Weak transcription	Right Ventricle	heart
9	chr14:69216600-69224200	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr14:69217000-69222600	Weak transcription	Placenta	Placenta
11	chr14:69218400-69221200	Enhancers	Colon Smooth Muscle	Colon
12	chr14:69218600-69230800	Enhancers	Fetal Muscle Leg	muscle
13	chr14:69218600-69231600	Enhancers	Fetal Heart	heart
14	chr14:69218800-69220400	Enhancers	K562	blood
15	chr14:69218800-69221200	Enhancers	Rectal Smooth Muscle	rectum
16	chr14:69218800-69221800	Enhancers	Fetal Stomach	stomach
17	chr14:69218800-69222800	Weak transcription	Lung	lung
18	chr14:69218800-69225600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr14:69218800-69230800	Enhancers	Fetal Intestine Small	intestine
20	chr14:69219000-69221000	Enhancers	HepG2	liver
21	chr14:69219200-69221200	Enhancers	Adipose Nuclei	Adipose
22	chr14:69219200-69226000	Enhancers	Fetal Intestine Large	intestine
23	chr14:69219400-69221000	Weak transcription	Left Ventricle	heart
24	chr14:69219400-69221000	Weak transcription	Ovary	ovary
25	chr14:69219600-69220200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr14:69219600-69220400	Enhancers	Fetal Muscle Trunk	muscle
27	chr14:69219800-69220000	Enhancers	Fetal Kidney	kidney
28	chr14:69219800-69222400	Weak transcription	Stomach Mucosa	stomach
29	chr14:69219800-69223400	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr14:69219800-69223600	Enhancers	Fetal Lung	lung
31	chr14:69219800-69225400	Enhancers	NHDF-Ad	bronchial

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