Variant report

Variant	rs194771
Chromosome Location	chr14:69203506-69203507
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69201544..69205045-chr14:69260784..69263529,4	K562	blood:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1274937	1.00[EUR][1000 genomes]
rs1275049	1.00[GIH][hapmap];0.88[MEX][hapmap];0.92[TSI][hapmap]
rs168966	1.00[EUR][1000 genomes]
rs194774	1.00[EUR][1000 genomes]
rs194775	0.87[EUR][1000 genomes]
rs194785	1.00[CEU][hapmap];1.00[GIH][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs450420	1.00[GIH][hapmap];0.88[MEX][hapmap];0.92[TSI][hapmap]
rs7151054	0.88[MEX][hapmap];0.84[TSI][hapmap];0.85[EUR][1000 genomes]
rs911405	0.83[YRI][hapmap]

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69196400-69203600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr14:69198400-69214000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr14:69199000-69203600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:69199200-69204400	Enhancers	Brain Germinal Matrix	brain
5	chr14:69199400-69203800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr14:69199600-69206800	Enhancers	Fetal Muscle Leg	muscle
7	chr14:69199800-69203800	Enhancers	Fetal Thymus	thymus
8	chr14:69199800-69204000	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr14:69200000-69204200	Enhancers	Adipose Nuclei	Adipose
10	chr14:69200000-69205400	Enhancers	Fetal Muscle Trunk	muscle
11	chr14:69200200-69207000	Enhancers	Fetal Stomach	stomach
12	chr14:69201000-69206200	Enhancers	Fetal Heart	heart
13	chr14:69201200-69222600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr14:69202000-69204800	Weak transcription	Spleen	Spleen
15	chr14:69202200-69204400	Enhancers	Fetal Lung	lung
16	chr14:69202400-69203800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr14:69202400-69203800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr14:69202400-69204000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr14:69202400-69204000	Enhancers	Duodenum Smooth Muscle	Duodenum
20	chr14:69202400-69204000	Enhancers	Stomach Mucosa	stomach
21	chr14:69202400-69204200	Enhancers	Placenta	Placenta
22	chr14:69202400-69204400	Enhancers	Right Atrium	heart
23	chr14:69202400-69204400	Enhancers	Right Ventricle	heart
24	chr14:69202400-69206200	Enhancers	Ovary	ovary
25	chr14:69202600-69203600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr14:69202600-69203600	Enhancers	Muscle Satellite Cultured Cells	--
27	chr14:69202600-69203600	Flanking Active TSS	HSMMtube	muscle
28	chr14:69202600-69203800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr14:69202600-69203800	Enhancers	NHDF-Ad	bronchial
30	chr14:69202600-69204400	Enhancers	Placenta Amnion	Placenta Amnion
31	chr14:69202600-69209000	Weak transcription	Primary T helper cells PMA-I stimulated	--
32	chr14:69202800-69203600	Enhancers	Brain Anterior Caudate	brain
33	chr14:69202800-69203600	Enhancers	Brain Cingulate Gyrus	brain
34	chr14:69202800-69203600	Enhancers	Esophagus	oesophagus
35	chr14:69202800-69203800	Enhancers	iPS-20b Cell Line	embryonic stem cell
36	chr14:69202800-69204000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr14:69202800-69204200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr14:69202800-69204200	Enhancers	HSMM	muscle
39	chr14:69202800-69204400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr14:69202800-69204400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr14:69202800-69204400	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr14:69202800-69205200	Enhancers	Fetal Intestine Small	intestine
43	chr14:69202800-69224600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
44	chr14:69203000-69203600	Enhancers	Duodenum Mucosa	Duodenum
45	chr14:69203000-69203600	Enhancers	K562	blood
46	chr14:69203000-69203600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
47	chr14:69203000-69203800	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr14:69203000-69203800	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr14:69203000-69203800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr14:69203000-69203800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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