Variant report

Variant	rs9635254
Chromosome Location	chr14:69224153-69224154
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:69224134..69226180-chr14:69230728..69233556,2	K562	blood:
2	chr14:69223323..69225875-chr14:69227870..69230054,2	K562	blood:
3	chr14:69222295..69225279-chr14:69240661..69244475,4	MCF-7	breast:
4	chr14:69207813..69210397-chr14:69223055..69224594,2	K562	blood:
5	chr14:69223818..69225694-chr14:69260222..69261758,2	MCF-7	breast:
6	chr14:69218627..69226949-chr14:69256316..69264627,15	K562	blood:
7	chr14:69223513..69226037-chr14:69236750..69239337,3	K562	blood:
8	chr14:69160612..69162460-chr14:69223212..69225685,2	K562	blood:
9	chr14:69217090..69220380-chr14:69222883..69225939,5	K562	blood:
10	chr14:69217466..69219911-chr14:69223716..69225939,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10143137	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs4899257	0.82[JPT][hapmap]
rs7151054	0.82[CHB][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs8016829	1.00[CHB][hapmap]
rs8020714	0.82[CHB][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456332	chr14:69216412-69230080	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv564963	chr14:69216412-69230080	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:66 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69202800-69224600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr14:69212600-69229200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:69214600-69224600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr14:69216600-69224200	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr14:69218600-69230800	Enhancers	Fetal Muscle Leg	muscle
6	chr14:69218600-69231600	Enhancers	Fetal Heart	heart
7	chr14:69218800-69225600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr14:69218800-69230800	Enhancers	Fetal Intestine Small	intestine
9	chr14:69219200-69226000	Enhancers	Fetal Intestine Large	intestine
10	chr14:69219800-69225400	Enhancers	NHDF-Ad	bronchial
11	chr14:69220400-69226800	Enhancers	Fetal Kidney	kidney
12	chr14:69220800-69227400	Enhancers	Fetal Muscle Trunk	muscle
13	chr14:69221200-69224200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr14:69221200-69229200	Weak transcription	Osteobl	bone
15	chr14:69221600-69229600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr14:69221600-69229600	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr14:69222200-69225000	Enhancers	Fetal Stomach	stomach
18	chr14:69222200-69225200	Enhancers	Primary B cells from peripheral blood	blood
19	chr14:69222400-69224200	Enhancers	Pancreas	Pancrea
20	chr14:69222400-69225000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr14:69222400-69225200	Enhancers	Primary B cells from cord blood	blood
22	chr14:69222400-69226200	Enhancers	Stomach Mucosa	stomach
23	chr14:69222600-69224600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr14:69222600-69224800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr14:69222600-69230200	Enhancers	Placenta	Placenta
26	chr14:69222600-69235600	Enhancers	Ovary	ovary
27	chr14:69222800-69224200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr14:69222800-69224200	Enhancers	Brain Hippocampus Middle	brain
29	chr14:69222800-69225400	Enhancers	Liver	Liver
30	chr14:69222800-69225600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr14:69222800-69225600	Enhancers	Spleen	Spleen
32	chr14:69222800-69225800	Enhancers	Lung	lung
33	chr14:69222800-69226200	Enhancers	Adipose Nuclei	Adipose
34	chr14:69222800-69227800	Enhancers	HSMMtube	muscle
35	chr14:69223000-69227200	Enhancers	Primary hematopoietic stem cells short term culture	blood
36	chr14:69223200-69224400	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
37	chr14:69223200-69224800	Enhancers	K562	blood
38	chr14:69223200-69225800	Enhancers	Skeletal Muscle Female	skeletal muscle
39	chr14:69223200-69226000	Enhancers	Primary hematopoietic stem cells	blood
40	chr14:69223200-69226200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr14:69223200-69230200	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr14:69223400-69225000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
43	chr14:69223400-69226200	Enhancers	Skeletal Muscle Male	skeletal muscle
44	chr14:69223400-69226400	Enhancers	Right Ventricle	heart
45	chr14:69223400-69227000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr14:69223400-69227800	Enhancers	HSMM	muscle
47	chr14:69223600-69224600	Enhancers	Esophagus	oesophagus
48	chr14:69223600-69225200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
49	chr14:69223600-69225600	Enhancers	Fetal Thymus	thymus
50	chr14:69223600-69225800	Enhancers	Left Ventricle	heart

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