The 2.0 version of rSNPBase

Variant report

Variant rs60162800
Chromosome Location chr17:67412190-67412191
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:67409800-67413200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr17:67410200-67412400 Active TSS Colonic Mucosa Colon
3 chr17:67410400-67412200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr17:67410400-67412200 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr17:67410400-67412200 Active TSS iPS-18 Cell Line embryonic stem cell
6 chr17:67410400-67412200 Active TSS Primary T helper naive cells from peripheral blood blood
7 chr17:67410400-67412200 Active TSS Brain Anterior Caudate brain
8 chr17:67410400-67412200 Active TSS Brain Germinal Matrix brain
9 chr17:67410400-67412200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr17:67410400-67412200 Active TSS Fetal Lung lung
11 chr17:67410400-67412400 Active TSS iPS-20b Cell Line embryonic stem cell
12 chr17:67410400-67412400 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr17:67410400-67412400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
14 chr17:67410400-67412400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr17:67410400-67412400 Active TSS Fetal Intestine Small intestine
16 chr17:67410400-67412400 Active TSS Fetal Kidney kidney
17 chr17:67410400-67412400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
18 chr17:67410400-67412600 Active TSS H9 Cell Line embryonic stem cell
19 chr17:67410400-67412600 Flanking Active TSS Primary hematopoietic stem cells blood
20 chr17:67410400-67412600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr17:67410400-67412600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
22 chr17:67410400-67412600 Flanking Active TSS Adipose Nuclei Adipose
23 chr17:67410400-67412600 Active TSS Fetal Muscle Trunk muscle
24 chr17:67410400-67412600 Active TSS Right Atrium heart
25 chr17:67410400-67413000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
26 chr17:67410400-67413000 Active TSS Psoas Muscle Psoas
27 chr17:67410400-67413000 Flanking Active TSS HUVEC blood vessel
28 chr17:67410400-67413200 Active TSS H1 Cell Line embryonic stem cell
29 chr17:67410400-67413200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr17:67410400-67414000 Active TSS Rectal Smooth Muscle rectum
31 chr17:67410400-67414200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr17:67410400-67414200 Active TSS Skeletal Muscle Male skeletal muscle
33 chr17:67410400-67415400 Active TSS GM12878-XiMat blood
34 chr17:67410600-67412200 Active TSS Sigmoid Colon Sigmoid Colon
35 chr17:67410600-67412200 Active TSS Thymus Thymus
36 chr17:67410600-67412200 Active TSS Hela-S3 cervix
37 chr17:67410800-67412600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr17:67410800-67412800 Active TSS Fetal Thymus thymus
39 chr17:67411000-67412400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
40 chr17:67411000-67412600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr17:67411000-67412600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
42 chr17:67411000-67413000 Active TSS Primary T cells fromperipheralblood blood
43 chr17:67411200-67412200 Active TSS Primary T killer naive cells fromperipheralblood blood
44 chr17:67411200-67412200 Active TSS Stomach Smooth Muscle stomach
45 chr17:67411200-67412600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
46 chr17:67411200-67412600 Flanking Active TSS Dnd41 blood
47 chr17:67411200-67418600 Weak transcription Spleen Spleen
48 chr17:67411400-67412400 Active TSS HUES6 Cell Line embryonic stem cell
49 chr17:67411400-67412600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr17:67411400-67413800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015