The 2.0 version of rSNPBase

Variant report

Variant rs60306113
Chromosome Location chr2:233999326-233999327
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:233984000-234003600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:233986600-234001200 Strong transcription Primary T helper naive cells fromperipheralblood blood
3 chr2:233986600-234001600 Strong transcription Primary hematopoietic stem cells blood
4 chr2:233986600-234001800 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr2:233988600-234003400 Weak transcription HUVEC blood vessel
6 chr2:233989400-234000400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr2:233989800-234003400 Strong transcription Primary monocytes fromperipheralblood blood
8 chr2:233990400-234002000 Strong transcription Primary B cells from cord blood blood
9 chr2:233990800-234001600 Weak transcription Gastric stomach
10 chr2:233991000-234002200 Weak transcription Rectal Smooth Muscle rectum
11 chr2:233991200-234002800 Weak transcription Left Ventricle heart
12 chr2:233992000-234000000 Weak transcription Liver Liver
13 chr2:233992000-234002600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr2:233994000-233999600 Strong transcription Dnd41 blood
15 chr2:233994200-234002800 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr2:233994600-234001800 Strong transcription Primary T helper naive cells from peripheral blood blood
17 chr2:233994600-234003000 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr2:233995000-233999400 Strong transcription HepG2 liver
19 chr2:233995000-234001400 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr2:233995000-234001800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:233995200-234000400 Strong transcription Thymus Thymus
22 chr2:233995200-234000600 Strong transcription Primary T cells from cord blood blood
23 chr2:233995200-234001200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
24 chr2:233995200-234001600 Strong transcription Fetal Thymus thymus
25 chr2:233995200-234001800 Strong transcription Primary T killer naive cells fromperipheralblood blood
26 chr2:233995200-234002200 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr2:233995200-234003400 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr2:233995200-234003600 Strong transcription Primary B cells from peripheral blood blood
29 chr2:233995400-234000400 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr2:233995400-234001200 Strong transcription Primary T killer memory cells from peripheral blood blood
31 chr2:233996400-234000400 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr2:233996800-233999600 Strong transcription Spleen Spleen
33 chr2:233997200-233999400 Strong transcription Placenta Placenta
34 chr2:233997200-234002200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr2:233997600-234000200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr2:233998200-234000200 Strong transcription Adipose Nuclei Adipose
37 chr2:233998400-233999400 Genic enhancers Primary T cells fromperipheralblood blood
38 chr2:233998600-234001000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr2:233998600-234001000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:233998800-234000600 Weak transcription Lung lung
41 chr2:233998800-234000800 ZNF genes & repeats GM12878-XiMat blood
42 chr2:233999000-234000000 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015