The 2.0 version of rSNPBase

Variant report

Variant rs60390801
Chromosome Location chr5:35623874-35623875
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35618600-35633800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:35618600-35646800 Weak transcription Spleen Spleen
3 chr5:35618600-35653800 Weak transcription Lung lung
4 chr5:35618600-35678000 Weak transcription Left Ventricle heart
5 chr5:35618800-35625800 Weak transcription Aorta Aorta
6 chr5:35618800-35628600 Weak transcription Ovary ovary
7 chr5:35619000-35629400 Weak transcription Primary T cells fromperipheralblood blood
8 chr5:35619000-35629800 Weak transcription Fetal Intestine Large intestine
9 chr5:35619000-35631400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr5:35619000-35632400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:35619000-35632600 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr5:35619000-35634400 Weak transcription Primary T cells from cord blood blood
13 chr5:35619000-35634400 Weak transcription Duodenum Mucosa Duodenum
14 chr5:35619000-35638000 Weak transcription Colon Smooth Muscle Colon
15 chr5:35619000-35644200 Weak transcription Brain Hippocampus Middle brain
16 chr5:35619000-35651400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr5:35619000-35651600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr5:35619000-35652000 Weak transcription Rectal Smooth Muscle rectum
19 chr5:35619200-35624000 Weak transcription Brain Anterior Caudate brain
20 chr5:35619200-35628600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr5:35619200-35628600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr5:35619200-35629400 Weak transcription Fetal Intestine Small intestine
23 chr5:35619200-35629800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr5:35619200-35629800 Weak transcription Adipose Nuclei Adipose
25 chr5:35619200-35629800 Weak transcription Liver Liver
26 chr5:35619200-35629800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr5:35619200-35630200 Weak transcription Fetal Stomach stomach
28 chr5:35619200-35630200 Weak transcription Pancreas Pancrea
29 chr5:35619200-35632200 Weak transcription Brain Cingulate Gyrus brain
30 chr5:35619200-35632200 Weak transcription Fetal Muscle Leg muscle
31 chr5:35619200-35632400 Weak transcription Brain Angular Gyrus brain
32 chr5:35619200-35634200 Weak transcription Stomach Smooth Muscle stomach
33 chr5:35619200-35634400 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr5:35619200-35634400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr5:35619200-35635400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr5:35619200-35637600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr5:35619200-35639000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:35619200-35644000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr5:35619200-35645800 Weak transcription Small Intestine intestine
40 chr5:35619200-35646000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:35619200-35649800 Weak transcription Hela-S3 cervix
42 chr5:35619200-35651400 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr5:35619400-35628600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr5:35619400-35628600 Weak transcription Fetal Lung lung
45 chr5:35619400-35629800 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr5:35619400-35629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr5:35619400-35629800 Weak transcription Fetal Kidney kidney
48 chr5:35619400-35632400 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr5:35619400-35634000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:35619400-35634200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015