Variant report

Variant	rs60410633
Chromosome Location	chr5:68300400-68300401
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56677912	1.00[AMR][1000 genomes]
rs59351555	1.00[AMR][1000 genomes]
rs59598125	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73772085	1.00[AMR][1000 genomes]
rs73772098	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763462	chr5:68295338-68307023	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68298000-68301600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr5:68300200-68300800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr5:68300400-68300600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr5:68300400-68300600	Enhancers	Fetal Lung	lung
5	chr5:68300400-68301000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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