Variant report

Variant	rs73772098
Chromosome Location	chr5:68316253-68316254
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs55634648	1.00[AMR][1000 genomes]
rs55657218	1.00[AMR][1000 genomes]
rs56079800	1.00[AMR][1000 genomes]
rs58052452	1.00[AMR][1000 genomes]
rs59598125	0.91[AFR][1000 genomes]
rs59802548	1.00[AMR][1000 genomes]
rs60410633	0.91[AFR][1000 genomes]
rs73771636	1.00[AMR][1000 genomes]
rs73771637	1.00[AMR][1000 genomes]
rs73771638	1.00[AMR][1000 genomes]
rs73771640	1.00[AMR][1000 genomes]
rs73771642	1.00[AMR][1000 genomes]
rs73771643	1.00[AMR][1000 genomes]
rs73771646	1.00[AMR][1000 genomes]
rs73772083	1.00[AMR][1000 genomes]
rs73772084	1.00[AMR][1000 genomes]
rs73772087	1.00[AMR][1000 genomes]
rs73772444	1.00[AMR][1000 genomes]
rs73772450	1.00[AMR][1000 genomes]
rs73772456	1.00[AMR][1000 genomes]
rs73772457	1.00[AMR][1000 genomes]
rs73772458	1.00[AMR][1000 genomes]
rs73772461	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv598413	chr5:68306058-68320702	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv598414	chr5:68313068-68320494	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68316200-68316600	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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