Variant report

Variant	rs60427263
Chromosome Location	chr2:114880725-114880726
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17757626	0.81[AFR][1000 genomes]
rs6744148	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874904	chr2:114751691-115605062	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv829624	chr2:114791945-115119926	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3381703	chr2:114794745-114989429	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114878000-114881200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr2:114880000-114880800	Enhancers	H9 Cell Line	embryonic stem cell
3	chr2:114880000-114880800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr2:114880000-114881200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr2:114880400-114880800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr2:114880400-114881000	Enhancers	Brain Hippocampus Middle	brain
7	chr2:114880400-114881200	Enhancers	Fetal Brain Female	brain
8	chr2:114880600-114881000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr2:114880600-114881000	Enhancers	Brain Cingulate Gyrus	brain
10	chr2:114880600-114881400	Enhancers	Brain Germinal Matrix	brain
11	chr2:114880600-114881400	Enhancers	Fetal Lung	lung
12	chr2:114880600-114881600	Enhancers	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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