Variant report
Variant | rs6043879 |
---|---|
Chromosome Location | chr20:16286595-16286596 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:16247600-16290800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
2 | chr20:16248600-16291400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
3 | chr20:16252000-16289400 | Weak transcription | Rectal Smooth Muscle | rectum |
4 | chr20:16254000-16290800 | Weak transcription | Esophagus | oesophagus |
5 | chr20:16254000-16298400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
6 | chr20:16262600-16346200 | Weak transcription | Gastric | stomach |
7 | chr20:16264800-16290800 | Weak transcription | Lung | lung |
8 | chr20:16265000-16289000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
9 | chr20:16265800-16289200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
10 | chr20:16270800-16302400 | Weak transcription | Brain Hippocampus Middle | brain |
11 | chr20:16276400-16348200 | Weak transcription | Colon Smooth Muscle | Colon |
12 | chr20:16282000-16286600 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
13 | chr20:16282000-16287400 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
14 | chr20:16283400-16295800 | Weak transcription | Fetal Lung | lung |
15 | chr20:16283600-16289400 | Weak transcription | Fetal Muscle Trunk | muscle |
16 | chr20:16284000-16289200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
17 | chr20:16284400-16290800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
18 | chr20:16284400-16313600 | Weak transcription | Primary hematopoietic stem cells | blood |
19 | chr20:16284600-16287200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
20 | chr20:16284600-16289200 | Weak transcription | Aorta | Aorta |
21 | chr20:16284600-16294400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
22 | chr20:16284600-16298200 | Weak transcription | Primary B cells from cord blood | blood |
23 | chr20:16284600-16313600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
24 | chr20:16284800-16289600 | Weak transcription | Adipose Nuclei | Adipose |
25 | chr20:16284800-16290800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
26 | chr20:16284800-16302400 | Weak transcription | Brain Substantia Nigra | brain |
27 | chr20:16284800-16302800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
28 | chr20:16285000-16290800 | Weak transcription | Left Ventricle | heart |
29 | chr20:16285000-16295000 | Weak transcription | Primary B cells from peripheral blood | blood |
30 | chr20:16285200-16286800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
31 | chr20:16285200-16294200 | Weak transcription | Brain Anterior Caudate | brain |
32 | chr20:16285400-16330000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
33 | chr20:16285800-16291400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
34 | chr20:16286000-16298200 | Weak transcription | Ovary | ovary |
35 | chr20:16286200-16288200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |